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The map label for this gene is ydjA [H]

Identifier: 162145912

GI number: 162145912

Start: 78856

End: 79497

Strand: Direct

Name: ydjA [H]

Synonym: GDI_0074

Alternate gene names: 162145912

Gene position: 78856-79497 (Clockwise)

Preceding gene: 162145903

Following gene: 162145913

Centisome position: 2.0

GC content: 67.91

Gene sequence:

>642_bases
ATGTCACAGGCCTGGCGGCATGTCGGGCCGACCCTATATAAAGGAGCATCCCGGATGGCCGTGCTCGACGCTCTCCTGTC
CCGTTCATCGACCGACATGCTGTCCGACCCCGCGCCAGAGGGTTCGGTGCTTGAAGACATCCTCTCCACGGCGATGCGCG
CGCCCGACCATGGCAAGCTGCGGCCGTGGCGCTATGTCCTGGTCCGGGGCGACGCCCGGCCGAAACTGGCCGAACTGGTG
GTGGCTGGCATGCTGGCGCGTGACCCGGACGTCCCGGCCGCGAAGATCGAAAAACGCCGCGTGCGCTTTTCCACCATGCC
GCTGACCATCGCACTGGGCATGCATCTGCATCCCGACGACAAGATCCCGGTGATCGAGCAGGAAATGGCCGTCGCCGCCG
CGGCAATGAACGTCCTCAATGCCCTGCACGCCACCGGTTTCGGCGGCGTGTGGGTAACGGGCGACATGACGTATGATCCT
GCCGTCGCGGCCGCACTGGGCTTCGCGGCGCCACATCGCCTGGCGGGCTTCCTGTTCGTGGGCACCCCGGATTCCGCCCG
CCCGGTGCCGACCCGCCGCCCGGTCGGCGGGTACGTCGCCGAATGGCACGGCACGCCGGTCGTCTTCGACGCCGATCACT
GA

Upstream 100 bases:

>100_bases
TGTGCAGTGTCCGGCCCGTGGGGGGGCATCGGCGGATATTGGCTTGGCCTGCCTTCTGCGGCATGGTGCCGACCCGCTGC
CGCTCGCGGCCGCCGGCCGG

Downstream 100 bases:

>100_bases
CCGCGGGACCAGAGGAGGACGCCATGCACAGCGACGTTACGATCATTGGTGGCGGCCCCGCGGGCCTGGCCACGGCTCTG
TCGCTGGACGCGGCGGGCCT

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSQAWRHVGPTLYKGASRMAVLDALLSRSSTDMLSDPAPEGSVLEDILSTAMRAPDHGKLRPWRYVLVRGDARPKLAELV
VAGMLARDPDVPAAKIEKRRVRFSTMPLTIALGMHLHPDDKIPVIEQEMAVAAAAMNVLNALHATGFGGVWVTGDMTYDP
AVAAALGFAAPHRLAGFLFVGTPDSARPVPTRRPVGGYVAEWHGTPVVFDADH

Sequences:

>Translated_213_residues
MSQAWRHVGPTLYKGASRMAVLDALLSRSSTDMLSDPAPEGSVLEDILSTAMRAPDHGKLRPWRYVLVRGDARPKLAELV
VAGMLARDPDVPAAKIEKRRVRFSTMPLTIALGMHLHPDDKIPVIEQEMAVAAAAMNVLNALHATGFGGVWVTGDMTYDP
AVAAALGFAAPHRLAGFLFVGTPDSARPVPTRRPVGGYVAEWHGTPVVFDADH
>Mature_212_residues
SQAWRHVGPTLYKGASRMAVLDALLSRSSTDMLSDPAPEGSVLEDILSTAMRAPDHGKLRPWRYVLVRGDARPKLAELVV
AGMLARDPDVPAAKIEKRRVRFSTMPLTIALGMHLHPDDKIPVIEQEMAVAAAAMNVLNALHATGFGGVWVTGDMTYDPA
VAAALGFAAPHRLAGFLFVGTPDSARPVPTRRPVGGYVAEWHGTPVVFDADH

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=166, Percent_Identity=36.144578313253, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 22906; Mature: 22775

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAWRHVGPTLYKGASRMAVLDALLSRSSTDMLSDPAPEGSVLEDILSTAMRAPDHGKL
CCCCHHHCCHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCC
RPWRYVLVRGDARPKLAELVVAGMLARDPDVPAAKIEKRRVRFSTMPLTIALGMHLHPDD
CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCEEEEECCEECCCC
KIPVIEQEMAVAAAAMNVLNALHATGFGGVWVTGDMTYDPAVAAALGFAAPHRLAGFLFV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCHHHHEEEEEE
GTPDSARPVPTRRPVGGYVAEWHGTPVVFDADH
ECCCCCCCCCCCCCCCCEEEEECCCEEEEECCC
>Mature Secondary Structure 
SQAWRHVGPTLYKGASRMAVLDALLSRSSTDMLSDPAPEGSVLEDILSTAMRAPDHGKL
CCCHHHCCHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCC
RPWRYVLVRGDARPKLAELVVAGMLARDPDVPAAKIEKRRVRFSTMPLTIALGMHLHPDD
CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCEEEEECCEECCCC
KIPVIEQEMAVAAAAMNVLNALHATGFGGVWVTGDMTYDPAVAAALGFAAPHRLAGFLFV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCHHHHEEEEEE
GTPDSARPVPTRRPVGGYVAEWHGTPVVFDADH
ECCCCCCCCCCCCCCCCEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]