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The map label for this gene is visC [H]

Identifier: 162145913

GI number: 162145913

Start: 79521

End: 80699

Strand: Direct

Name: visC [H]

Synonym: GDI_0075

Alternate gene names: 162145913

Gene position: 79521-80699 (Clockwise)

Preceding gene: 162145912

Following gene: 162145920

Centisome position: 2.02

GC content: 69.04

Gene sequence:

>1179_bases
ATGCACAGCGACGTTACGATCATTGGTGGCGGCCCCGCGGGCCTGGCCACGGCTCTGTCGCTGGACGCGGCGGGCCTGTC
TGTCACGGTGCTGGAGCGTGCGCCGCTGGCCGCCCTGGCCGATCCCGCGTTCGACGGGCGGGAAATCGCCCTGACCCACC
ATGCGGTGTCCATCCTGCGTGGCAGCGGCGCCTGGGCGCGGATCCCCGATATCGGCATCTCCCTGCTGCGCGAGGCCAGG
GTGGAAACCGGGCGCCACAACCATCCGCTGACCTTCGATACGCATGGCACGGGGGTCGAGGCCCTTGGTTATCTGGTCTC
CAATCACCTGATCCGCCGCGCGTTGTACGAGGAAGTCGCCTCCCGCCCCGGCATCGTCGTGCGCGCCGGCGTGGCCACAC
GGCGCGTGCGTGACGACAGCGACGGCGTCACGGTGCTGGCGGAAGGCGGTGACGTCGCCTGCCGCCTGGCGATCGCCGCC
GACGGCCGGTTCTCGGACATTCGCCGCCTGCGCGGCATCGGCGCCATCATCCATGATTTCCATCGGGCGATGCTGGTGTG
CCGCATGGCGCACGAATCGCCCCATCATCATGTGGCGACCCAGTGGTTCGATGACGGGCAGACCGTGGCCCTGCTGCCGG
TCAATGGCGGCGCGTCCTCGCTGGTCCTGACCCTGCCGCCGGAGCAGATCGAAACCCTGCGGACCATGGATCGCGACCGC
TTCAACGCCGACATCATGGCCCGCATCGGCAACCGGCTGGGGGAAATGCGGCTGGTCAGTACCCGCCACGTCTATCCGCT
GCGCGCGGTCTATGCCCATCGCTTCGCCGCGCGGCGCTTCGCCCTGATCGGTGACGCGGCGGTGGGCATGCACCCGATCA
CCGCGCACGGCTTCAATCTGGGCCTGAAAGGGCAGGAGATCCTGGCCCAGGAAATCGTCGCCGGCATGGCGCGTGACGGT
GACCCCGGCTCGGCCCGGGTGCTGCGGCGATTCGAAGCCCGGCACCGCATGGCCACCGCGCCGCTGTTCGCGGCCACCAA
CGGAATCGCCACCCTCTATACGCGGGACGAAGCCCCCTTCCGCCAACTGCGCCGGGCCGGCCTGCGGGTGGCCGATTCGC
TCGCGCCGTTCAAGGCGGCGGTCACGAACATGCTGATGGATAACAAAAAAACGGCGTAA

Upstream 100 bases:

>100_bases
TGCCGACCCGCCGCCCGGTCGGCGGGTACGTCGCCGAATGGCACGGCACGCCGGTCGTCTTCGACGCCGATCACTGACCG
CGGGACCAGAGGAGGACGCC

Downstream 100 bases:

>100_bases
AACCGCCGTTCTTGTCCGCCCGGTCCGAAAAGGCGGAAAAAAATCGGCCCCCTGTGTTGACGGTATGTGTGGTGGGGTGT
AGATCGCTGTTCACCGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MHSDVTIIGGGPAGLATALSLDAAGLSVTVLERAPLAALADPAFDGREIALTHHAVSILRGSGAWARIPDIGISLLREAR
VETGRHNHPLTFDTHGTGVEALGYLVSNHLIRRALYEEVASRPGIVVRAGVATRRVRDDSDGVTVLAEGGDVACRLAIAA
DGRFSDIRRLRGIGAIIHDFHRAMLVCRMAHESPHHHVATQWFDDGQTVALLPVNGGASSLVLTLPPEQIETLRTMDRDR
FNADIMARIGNRLGEMRLVSTRHVYPLRAVYAHRFAARRFALIGDAAVGMHPITAHGFNLGLKGQEILAQEIVAGMARDG
DPGSARVLRRFEARHRMATAPLFAATNGIATLYTRDEAPFRQLRRAGLRVADSLAPFKAAVTNMLMDNKKTA

Sequences:

>Translated_392_residues
MHSDVTIIGGGPAGLATALSLDAAGLSVTVLERAPLAALADPAFDGREIALTHHAVSILRGSGAWARIPDIGISLLREAR
VETGRHNHPLTFDTHGTGVEALGYLVSNHLIRRALYEEVASRPGIVVRAGVATRRVRDDSDGVTVLAEGGDVACRLAIAA
DGRFSDIRRLRGIGAIIHDFHRAMLVCRMAHESPHHHVATQWFDDGQTVALLPVNGGASSLVLTLPPEQIETLRTMDRDR
FNADIMARIGNRLGEMRLVSTRHVYPLRAVYAHRFAARRFALIGDAAVGMHPITAHGFNLGLKGQEILAQEIVAGMARDG
DPGSARVLRRFEARHRMATAPLFAATNGIATLYTRDEAPFRQLRRAGLRVADSLAPFKAAVTNMLMDNKKTA
>Mature_392_residues
MHSDVTIIGGGPAGLATALSLDAAGLSVTVLERAPLAALADPAFDGREIALTHHAVSILRGSGAWARIPDIGISLLREAR
VETGRHNHPLTFDTHGTGVEALGYLVSNHLIRRALYEEVASRPGIVVRAGVATRRVRDDSDGVTVLAEGGDVACRLAIAA
DGRFSDIRRLRGIGAIIHDFHRAMLVCRMAHESPHHHVATQWFDDGQTVALLPVNGGASSLVLTLPPEQIETLRTMDRDR
FNADIMARIGNRLGEMRLVSTRHVYPLRAVYAHRFAARRFALIGDAAVGMHPITAHGFNLGLKGQEILAQEIVAGMARDG
DPGSARVLRRFEARHRMATAPLFAATNGIATLYTRDEAPFRQLRRAGLRVADSLAPFKAAVTNMLMDNKKTA

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=418, Percent_Identity=25.5980861244019, Blast_Score=103, Evalue=3e-22,
Organism=Escherichia coli, GI1789273, Length=388, Percent_Identity=31.701030927835, Blast_Score=167, Evalue=2e-42,
Organism=Escherichia coli, GI1786883, Length=378, Percent_Identity=29.3650793650794, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1789274, Length=377, Percent_Identity=27.5862068965517, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25146631, Length=445, Percent_Identity=26.0674157303371, Blast_Score=120, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6321694, Length=462, Percent_Identity=24.2424242424242, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19920760, Length=414, Percent_Identity=24.8792270531401, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42331; Mature: 42331

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDVTIIGGGPAGLATALSLDAAGLSVTVLERAPLAALADPAFDGREIALTHHAVSILR
CCCCEEEECCCCHHHHHHHEECCCCCEEEEECCCCHHHHCCCCCCCCEEEEHHHHHHHHC
GSGAWARIPDIGISLLREARVETGRHNHPLTFDTHGTGVEALGYLVSNHLIRRALYEEVA
CCCCEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRPGIVVRAGVATRRVRDDSDGVTVLAEGGDVACRLAIAADGRFSDIRRLRGIGAIIHDF
CCCCEEEECCCHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH
HRAMLVCRMAHESPHHHVATQWFDDGQTVALLPVNGGASSLVLTLPPEQIETLRTMDRDR
HHHHHHHHHHHCCCCCCEEHEEECCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHH
FNADIMARIGNRLGEMRLVSTRHVYPLRAVYAHRFAARRFALIGDAAVGMHPITAHGFNL
CCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCHHCCCCCEEECCCCC
GLKGQEILAQEIVAGMARDGDPGSARVLRRFEARHRMATAPLFAATNGIATLYTRDEAPF
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEECCCEEEEEECCCHHH
RQLRRAGLRVADSLAPFKAAVTNMLMDNKKTA
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHSDVTIIGGGPAGLATALSLDAAGLSVTVLERAPLAALADPAFDGREIALTHHAVSILR
CCCCEEEECCCCHHHHHHHEECCCCCEEEEECCCCHHHHCCCCCCCCEEEEHHHHHHHHC
GSGAWARIPDIGISLLREARVETGRHNHPLTFDTHGTGVEALGYLVSNHLIRRALYEEVA
CCCCEEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRPGIVVRAGVATRRVRDDSDGVTVLAEGGDVACRLAIAADGRFSDIRRLRGIGAIIHDF
CCCCEEEECCCHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH
HRAMLVCRMAHESPHHHVATQWFDDGQTVALLPVNGGASSLVLTLPPEQIETLRTMDRDR
HHHHHHHHHHHCCCCCCEEHEEECCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHHHHH
FNADIMARIGNRLGEMRLVSTRHVYPLRAVYAHRFAARRFALIGDAAVGMHPITAHGFNL
CCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHEECCHHCCCCCEEECCCCC
GLKGQEILAQEIVAGMARDGDPGSARVLRRFEARHRMATAPLFAATNGIATLYTRDEAPF
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEECCCEEEEEECCCHHH
RQLRRAGLRVADSLAPFKAAVTNMLMDNKKTA
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]