| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is 162145897
Identifier: 162145897
GI number: 162145897
Start: 65376
End: 66416
Strand: Reverse
Name: 162145897
Synonym: GDI_0059
Alternate gene names: NA
Gene position: 66416-65376 (Counterclockwise)
Preceding gene: 162145898
Following gene: 162145896
Centisome position: 1.68
GC content: 63.4
Gene sequence:
>1041_bases ATGCGCCGCCACCTCAATACCATCTATGTGACGACCGAGGATGCCTGGCTGCGCAAGGATGGCGCCAATGTGGTGGTCGA AGTCGAGGGCCAGGAGCGCGGTCGGGCCCCCATGCATCTGCTGGACGGGATCATGTGCTTTGGCCGGATCGGTGCGTCAC CGGCGCTGATGGGGGCCTGCGCGGAATCGGGCCTCGCGCTGTCATGGCTCTCCCCACAGGGGCGCTTCCTCGCCCGGGTC GAGGGACCAAGAAGCGGCAACGTGTTGCTGCGACGAACCCAGTATCGCACGGCAGACAGTACCGAACGCGCCTTGCCGAT CGTGCGAAACATGGTCGCCGCCAAGGCCGCCAATCAACGCACCGTCATCCGCCGGGCCCTGCGCGACCACGGCCCTGGAC TGAATGCGCAGGAGAGGACCCGACTGGACGAAGCCGAACGGCGCCTGACCATTATCGTGCGCCATATCACCCAGGCCCCG GATGTGGACACCGCACGGGGTATGGAGGGCGAGGCGGCGCAAGTCTATTTCGGAATCTTCAATCTTCTGATTCGGGTCGA AGGCGATGCATTCACCTTCGGTGGCCGGTCGCGGCGGCCGCCGCTCGACCGCGTGAATGCCCTGCTCTCGTTTCTCTATG CCGTTCTGGGACATGATTGCCGCTCCGCGCTCGAAAGCGTCGGTCTGGACCCGCAGGTCGGTTTCCTGCATGCGGATCGG CCGGGACGAAATAGCCTGGCACTGGACATGATGGAGGAATTGCGCCCCGTTCTGGCTGACCGACTGGCCGTGAGCCTGAT CAATCGACGGCAGGTCGCGGCAGGTGATTTTACCGTCAGCGATGGAGGCGCCGTCCTGCTGAACGACGACGCCCGCAAGA CGGTTCTCGTAGCCTGGCAGGACCGCAAGAAGAAGGAATTGCGGCACCCATTCCTTAATGAGTCCCTGACGTTCGGCCTT GTCGCACATGTCCAAGCGCTGCTTCTGTCCCGACACCTTCGTGGCGAACTGGACGGTTACCCAGCATTCGTGTGGAAATA G
Upstream 100 bases:
>100_bases AATGCTCCCTGCAGCACGCCTGCCAGCCGCGCCGATTGGAAAAGCCTCCCTCAATCGGCCGCTGGTTTGCGACACAACTG CTGGAAGAAGACAACGCGTG
Downstream 100 bases:
>100_bases GCGATGCTGGTGCTGATTACCTATGATGTAAACACCGAGGATGCGGCAGGCCGTAGACGGCTACGGCGCGTAGCACGCGC CTGCCTCGATTTCGGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRRHLNTIYVTTEDAWLRKDGANVVVEVEGQERGRAPMHLLDGIMCFGRIGASPALMGACAESGLALSWLSPQGRFLARV EGPRSGNVLLRRTQYRTADSTERALPIVRNMVAAKAANQRTVIRRALRDHGPGLNAQERTRLDEAERRLTIIVRHITQAP DVDTARGMEGEAAQVYFGIFNLLIRVEGDAFTFGGRSRRPPLDRVNALLSFLYAVLGHDCRSALESVGLDPQVGFLHADR PGRNSLALDMMEELRPVLADRLAVSLINRRQVAAGDFTVSDGGAVLLNDDARKTVLVAWQDRKKKELRHPFLNESLTFGL VAHVQALLLSRHLRGELDGYPAFVWK
Sequences:
>Translated_346_residues MRRHLNTIYVTTEDAWLRKDGANVVVEVEGQERGRAPMHLLDGIMCFGRIGASPALMGACAESGLALSWLSPQGRFLARV EGPRSGNVLLRRTQYRTADSTERALPIVRNMVAAKAANQRTVIRRALRDHGPGLNAQERTRLDEAERRLTIIVRHITQAP DVDTARGMEGEAAQVYFGIFNLLIRVEGDAFTFGGRSRRPPLDRVNALLSFLYAVLGHDCRSALESVGLDPQVGFLHADR PGRNSLALDMMEELRPVLADRLAVSLINRRQVAAGDFTVSDGGAVLLNDDARKTVLVAWQDRKKKELRHPFLNESLTFGL VAHVQALLLSRHLRGELDGYPAFVWK >Mature_346_residues MRRHLNTIYVTTEDAWLRKDGANVVVEVEGQERGRAPMHLLDGIMCFGRIGASPALMGACAESGLALSWLSPQGRFLARV EGPRSGNVLLRRTQYRTADSTERALPIVRNMVAAKAANQRTVIRRALRDHGPGLNAQERTRLDEAERRLTIIVRHITQAP DVDTARGMEGEAAQVYFGIFNLLIRVEGDAFTFGGRSRRPPLDRVNALLSFLYAVLGHDCRSALESVGLDPQVGFLHADR PGRNSLALDMMEELRPVLADRLAVSLINRRQVAAGDFTVSDGGAVLLNDDARKTVLVAWQDRKKKELRHPFLNESLTFGL VAHVQALLLSRHLRGELDGYPAFVWK
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002729 - InterPro: IPR019858 [H]
Pfam domain/function: PF01867 DUF48 [H]
EC number: NA
Molecular weight: Translated: 38426; Mature: 38426
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHLNTIYVTTEDAWLRKDGANVVVEVEGQERGRAPMHLLDGIMCFGRIGASPALMGAC CCCCCEEEEEEECCHHEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AESGLALSWLSPQGRFLARVEGPRSGNVLLRRTQYRTADSTERALPIVRNMVAAKAANQR HHCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHH TVIRRALRDHGPGLNAQERTRLDEAERRLTIIVRHITQAPDVDTARGMEGEAAQVYFGIF HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH NLLIRVEGDAFTFGGRSRRPPLDRVNALLSFLYAVLGHDCRSALESVGLDPQVGFLHADR HHHEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEECCC PGRNSLALDMMEELRPVLADRLAVSLINRRQVAAGDFTVSDGGAVLLNDDARKTVLVAWQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECCCCEEEECCCCCEEEEEEEC DRKKKELRHPFLNESLTFGLVAHVQALLLSRHLRGELDGYPAFVWK CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC >Mature Secondary Structure MRRHLNTIYVTTEDAWLRKDGANVVVEVEGQERGRAPMHLLDGIMCFGRIGASPALMGAC CCCCCEEEEEEECCHHEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH AESGLALSWLSPQGRFLARVEGPRSGNVLLRRTQYRTADSTERALPIVRNMVAAKAANQR HHCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHH TVIRRALRDHGPGLNAQERTRLDEAERRLTIIVRHITQAPDVDTARGMEGEAAQVYFGIF HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH NLLIRVEGDAFTFGGRSRRPPLDRVNALLSFLYAVLGHDCRSALESVGLDPQVGFLHADR HHHEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEECCC PGRNSLALDMMEELRPVLADRLAVSLINRRQVAAGDFTVSDGGAVLLNDDARKTVLVAWQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECCCCEEEECCCCCEEEEEEEC DRKKKELRHPFLNESLTFGLVAHVQALLLSRHLRGELDGYPAFVWK CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]