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The map label for this gene is 162145896

Identifier: 162145896

GI number: 162145896

Start: 65082

End: 65372

Strand: Reverse

Name: 162145896

Synonym: GDI_0058

Alternate gene names: NA

Gene position: 65372-65082 (Counterclockwise)

Preceding gene: 162145897

Following gene: 162145891

Centisome position: 1.66

GC content: 60.48

Gene sequence:

>291_bases
ATGCTGGTGCTGATTACCTATGATGTAAACACCGAGGATGCGGCAGGCCGTAGACGGCTACGGCGCGTAGCACGCGCCTG
CCTCGATTTCGGCCAGCGCGTGCAATATTCGGTGTTTGAATGCGAGGTGGACCCCGCACGCTGGACGGCCCTGCGGGCGC
GCCTGATCGCAGAGACCGACACCACAAAGGACAGCCTGCGCTTCTATCAGCTTGGAGCGAAAGGAAAGCAGCGGGTGGAA
CATATCGGTGCAAAGCCCGTCCTGGACCTGGATGGACCGCTTCTGTTCTGA

Upstream 100 bases:

>100_bases
CCTGACGTTCGGCCTTGTCGCACATGTCCAAGCGCTGCTTCTGTCCCGACACCTTCGTGGCGAACTGGACGGTTACCCAG
CATTCGTGTGGAAATAGGCG

Downstream 100 bases:

>100_bases
TCCTGCGCGATACGAAAGCTGTTGGGCAAACCCCTGCCGATTCGCGCATCTACCATGTGGTTTCCTATCAATGTGTTATG
CCCCAACGCAGATCGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; CRISPR-Associated Protein Cas2 Family; Crispr-Protein; Cas2 Family CRISPR-Associated Protein

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLVLITYDVNTEDAAGRRRLRRVARACLDFGQRVQYSVFECEVDPARWTALRARLIAETDTTKDSLRFYQLGAKGKQRVE
HIGAKPVLDLDGPLLF

Sequences:

>Translated_96_residues
MLVLITYDVNTEDAAGRRRLRRVARACLDFGQRVQYSVFECEVDPARWTALRARLIAETDTTKDSLRFYQLGAKGKQRVE
HIGAKPVLDLDGPLLF
>Mature_96_residues
MLVLITYDVNTEDAAGRRRLRRVARACLDFGQRVQYSVFECEVDPARWTALRARLIAETDTTKDSLRFYQLGAKGKQRVE
HIGAKPVLDLDGPLLF

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10953; Mature: 10953

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLITYDVNTEDAAGRRRLRRVARACLDFGQRVQYSVFECEVDPARWTALRARLIAETD
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCC
TTKDSLRFYQLGAKGKQRVEHIGAKPVLDLDGPLLF
CCHHHHHHHHCCCCHHHHHHHCCCCCEECCCCCCCC
>Mature Secondary Structure
MLVLITYDVNTEDAAGRRRLRRVARACLDFGQRVQYSVFECEVDPARWTALRARLIAETD
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCC
TTKDSLRFYQLGAKGKQRVEHIGAKPVLDLDGPLLF
CCHHHHHHHHCCCCHHHHHHHCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA