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The map label for this gene is ubiC [H]

Identifier: 161869676

GI number: 161869676

Start: 705622

End: 706146

Strand: Direct

Name: ubiC [H]

Synonym: NMCC_0694

Alternate gene names: 161869676

Gene position: 705622-706146 (Clockwise)

Preceding gene: 161869675

Following gene: 161869677

Centisome position: 32.77

GC content: 56.76

Gene sequence:

>525_bases
ATGGATGGAGTTGGCAAAAACAGACGCGGTATAAAGATTGGGAAAAATATGGAACACCTATTTGGGAAATGGCTGCCCGA
CTTGCCCACCCCCATTTCAGACGGCATCAGCCTGCCGATGGTGCGGCTGCTGCACACCCGGTCGCTGACCGCCGCATTGC
GCGCCTTGCCGCATACATTTTCGGTGGAACTGCTGAAACTGGGCGAATTGGAGACGGAATGCGGAGGGAGGCTGGTGCGC
GAAGTTTTGTTGAAGCTGGACGGTATCCCTGTTGTCGCGGCAAGGAGCGAGTGCCGGATAGGTTCGGCGTTTTGGCAAAA
CATTTTGGACTGCGGCACGCGCCCTTTGGGCGAGCGTCTGTTTCAAGCCGATTTGGAAGGGGCGCGTTCGGCGTTTGAGT
TTGCCGTTTCCGGCGAAGGATGCGGACGGTACTTTGCCGCGCGGCGTTCTCGGTTTTCCCGTCACGGCGAGGAAATGCTG
CTGACCGAGTATTTTCTGCCCGAACTGAAACGCTTTATCGGATAA

Upstream 100 bases:

>100_bases
TCGTGTTCAACCACATCCACGACAGCCGCGACGCACACATCGCCCAAGACAGCCTGAACTACTTGAAATGCCGTCTGAAA
GCCGATTTTTCCGAAGCGGA

Downstream 100 bases:

>100_bases
AATACCGTTTTTTCAAGCTGTGCGGCAATATGAATCCTAAATCCCCTTTATTTTTACGACTGTCCGACCGTTTGGATGTG
TACCTGCGCCTGATGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: CL; CPL [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MDGVGKNRRGIKIGKNMEHLFGKWLPDLPTPISDGISLPMVRLLHTRSLTAALRALPHTFSVELLKLGELETECGGRLVR
EVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGERLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEML
LTEYFLPELKRFIG

Sequences:

>Translated_174_residues
MDGVGKNRRGIKIGKNMEHLFGKWLPDLPTPISDGISLPMVRLLHTRSLTAALRALPHTFSVELLKLGELETECGGRLVR
EVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGERLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEML
LTEYFLPELKRFIG
>Mature_174_residues
MDGVGKNRRGIKIGKNMEHLFGKWLPDLPTPISDGISLPMVRLLHTRSLTAALRALPHTFSVELLKLGELETECGGRLVR
EVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGERLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEML
LTEYFLPELKRFIG

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway [H]

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007440 [H]

Pfam domain/function: PF04345 Chor_lyase [H]

EC number: =4.1.3.40 [H]

Molecular weight: Translated: 19429; Mature: 19429

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVGKNRRGIKIGKNMEHLFGKWLPDLPTPISDGISLPMVRLLHTRSLTAALRALPHTF
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGERL
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHH
FQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDGVGKNRRGIKIGKNMEHLFGKWLPDLPTPISDGISLPMVRLLHTRSLTAALRALPHTF
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH
SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGERL
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHH
FQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]