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The map label for this gene is ybeQ [C]

Identifier: 161869102

GI number: 161869102

Start: 92028

End: 93308

Strand: Direct

Name: ybeQ [C]

Synonym: NMCC_0092

Alternate gene names: 161869102

Gene position: 92028-93308 (Clockwise)

Preceding gene: 161869101

Following gene: 161869103

Centisome position: 4.27

GC content: 57.61

Gene sequence:

>1281_bases
TTGGGCAACCATCTGCTGCAAAACGGCCAACCGGAGCAGGCACTTTCATGGTTGGAAGCCGCCGCGGCCCAACGCCATCC
CAAAGCACTCTTCTCCCTGCTGCAACAACGCGAACACAACGGCACCCCGACCGGACAGCTTCTCAACGACTATGCCTGGC
TGGGTGAGCAGGGGCACTCAGAAGCCCAATTAATCCTCATGCGTTACCACGCGCAACGCAACGATCCACAATCGCTCTAC
TGGGCGGAACTTGCTGCCGCCCGATATGCCGCACCTGCGTATTACCATCTGGCACGCCATCATCAACGCCAAGGCGACGT
TGAAACAGCCATCGAACAATACGAAAAAGCGGCAGCACTCGGCGTAACTGCCGCCTGCTGGCAACTTGGTCAAATCTACT
TCTACGGTACAGGTGTCAGCCCCAACCACGCACAAGCCGAACACTATCTCGAACCAGCCGCACAAGCCGGCCACATCGCC
GCACAAACCCTGCTGGCCGACCTTCTTGCCGCCCAACGCAAACCCGAAGCCTTAGAATGGTATCGTCGTGCCGCCAATAA
GGAGCAAGCGGAAGCACAAGCCAAGCTGGCCCAATACGCCCTGACCGGCGAACTTTCCGAACGCGATCCGTTCCAAGCGG
CGCGCTATGCCAAAGCCGCTGCCGAGAAAAACCATCCTGAAGCCCTGAAAATCATGGGCGACCTCTACCGCTACGGCCTC
GGCATCAAAGCTGACAACCATATCGCGCACGATTACTACCACCGTGCTGCCGCGCTGGGTTCTGCCGCCGCAGCACAAAA
ACTCATCAGCGACGCCGCGCTGTACCATCCGCAACAATACGAACAAATCAAAACTGCCGCCCTGCAACAGCAACAAACCG
AAACCATCTACCGTTTGGCGGAAACACAAGCCCATGCCATCGGTCGTCCCGCCGACTATAATGCCGCACGCAAAAATTAC
ATGGAAGCTGCTGAGTTCCACCATAAAAACGCGGCGGCTGCCTTAGGCCGCATCTACCATTACGGCCTCGGTACGGCGCA
AGATCCTCGGGCGGCTGCACACTGGTACGCCATCGCTGCCGAACAAAACCACCCTTCCGCCCAATACCACCTCGCCTGTT
TTTACTATCACGGACAAGGTGTCGGCTGTCATGTTCCGACCGCCTGCTACTGGCTGCAGGCTGCCATCAGCAACGGCCAC
ACTTCGGCCGAATCATTAATATCCCTATTAGAACAATGGCGACGCGAAGCACACCATGCCATCGGACAAAAGGCCGTCTG
A

Upstream 100 bases:

>100_bases
CCGGCAAGCCGCCGCCCTTTTGGAACAATCCAATACCGCCCAAGCCCTGCCCCTGTTGCAACAGGCGGCAGAGCAAGGTT
ATGCGGAAGCTGCTTTCGTA

Downstream 100 bases:

>100_bases
AAAGATTTACACTCGCATTTTTTGACAATCTTTAACTATTCCCCTAATATTTGCCAGTTATTTTTCACGGACACGCCATT
GTTTTCATTTCTTTCTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MGNHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHSEAQLILMRYHAQRNDPQSLY
WAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAAALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIA
AQTLLADLLAAQRKPEALEWYRRAANKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGDLYRYGL
GIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQTETIYRLAETQAHAIGRPADYNAARKNY
MEAAEFHHKNAAAALGRIYHYGLGTAQDPRAAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGH
TSAESLISLLEQWRREAHHAIGQKAV

Sequences:

>Translated_426_residues
MGNHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHSEAQLILMRYHAQRNDPQSLY
WAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAAALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIA
AQTLLADLLAAQRKPEALEWYRRAANKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGDLYRYGL
GIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQTETIYRLAETQAHAIGRPADYNAARKNY
MEAAEFHHKNAAAALGRIYHYGLGTAQDPRAAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGH
TSAESLISLLEQWRREAHHAIGQKAV
>Mature_425_residues
GNHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHSEAQLILMRYHAQRNDPQSLYW
AELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAAALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAA
QTLLADLLAAQRKPEALEWYRRAANKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGDLYRYGLG
IKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQTETIYRLAETQAHAIGRPADYNAARKNYM
EAAEFHHKNAAAALGRIYHYGLGTAQDPRAAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGHT
SAESLISLLEQWRREAHHAIGQKAV

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 Sel1-like repeats [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=373, Percent_Identity=24.9329758713137, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI151301150, Length=328, Percent_Identity=25, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI87081769, Length=334, Percent_Identity=26.6467065868263, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786867, Length=115, Percent_Identity=38.2608695652174, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 47290; Mature: 47159

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAAAL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPEALEW
HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
YRRAANKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGDLYRYGL
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQTETIYRLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ETQAHAIGRPADYNAARKNYMEAAEFHHKNAAAALGRIYHYGLGTAQDPRAAAHWYAIAA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEE
EQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGHTSAESLISLLEQWRREAHHA
CCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IGQKAV
HCCCCC
>Mature Secondary Structure 
GNHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAAAL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPEALEW
HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
YRRAANKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGDLYRYGL
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQTETIYRLA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
ETQAHAIGRPADYNAARKNYMEAAEFHHKNAAAALGRIYHYGLGTAQDPRAAAHWYAIAA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEE
EQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGHTSAESLISLLEQWRREAHHA
CCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IGQKAV
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]