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The map label for this gene is lipB [H]

Identifier: 161869101

GI number: 161869101

Start: 90276

End: 91535

Strand: Direct

Name: lipB [H]

Synonym: NMCC_0091

Alternate gene names: 161869101

Gene position: 90276-91535 (Clockwise)

Preceding gene: 161869100

Following gene: 161869102

Centisome position: 4.19

GC content: 48.97

Gene sequence:

>1260_bases
ATGAAACAGACCGTCCTCAAAAATAACCTGCAAAACCTGCTTGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGCCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCGACTGGCTGACTGCAAACGGCAAAACCGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAGTTTTTGCAA
GAATACATCACTCAACATCACATCCAGGCCGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACCTTAGAAAAAGACG
GCGTCAACGCATTTTCCCCGTTGCCGCGCCGTGCCGACTTTTTTCTTGAACAATTCCCTAAGCTTGCCCAGCAAGAATAT
AAAGCGCCAACGCCGGTACACGGCGGTTTTACGCCCATGGCAAAAAACGCTATCCGTTACTATATCGAGTTGTTCCGCAA
TCCACGCAAATACCCCGACTACATCCACCACCGCGCACCCAATGCCGGCCATTACCTCAAACCGTGGTCGCTCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGTGTGGAAGCAGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTACAGGTATTCAACGACAGCCAAGTCCGTATCCATTGCGACTTTCCCAGCGTCCGCAGCTTCCTGCTCCATGT
TTTGAGTTCATTTGCCGAGCACGCGCCTGCCGATACCAACATCATCATCAAGCATCATCCGATGGACCGCGGTTTTATCG
ACTACTGGCGCGACATTAAACGCTTTATCAAAGAACACCCCGAACTCAAAGGCCGCGTGATTTATGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGTCTCGGCATGGTTACCATCAACAGCACCAGCGGCCTGTCCGGACTGATTCACAATAT
GCCAGTTAAGGTTCTCGGCCGTGCCTATTATGATATTCCCGGTATTACTGACCAAAATACCTTGGCAGAATTTTGGAATC
ATCCGACACCGCCTGACAAAGAGCTGTTCCATGCCTACCGAATGTACCACCTCAACGTGACCCAAATTAACGGCAACTTC
TACAGTCAGGTCTTTTTTCCTAACAAAAAAACCTCCGACTCTTCCACTCCAGCAACCTGA

Upstream 100 bases:

>100_bases
TCTATTGCGGCATCATTGCCTTTGCATCGTTAATTCTCTTGGCGTATGCTTGAAAGTTCAACCTAAAACTATTACATAAA
AAACAAAACCACATTGCAAC

Downstream 100 bases:

>100_bases
CTTAGCAAAAATAATTCAGGCCGTCTGAAAACATTTCAGACGGCCTGAAACAATCAATACCTTAGCTACTGCCATGTAAA
TAAAACACAAAAACCTGCAT

Product: capsule polysaccharide modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKKTSDSSTPAT

Sequences:

>Translated_419_residues
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKKTSDSSTPAT
>Mature_419_residues
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKKTSDSSTPAT

Specific function: Involved in the phospholipid modification of the capsular polysaccharide, a strong requirement for its translocation to the cell surface [H]

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 48663; Mature: 48663

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPP
CCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
TQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEE
CCCEEEEECCCCHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEECC
GYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEYKAPTPVHGGFTPMAKNAIRY
CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
YIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
HHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIK
EEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
RFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIP
HHHHHCCCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHCCC
GITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNFYSQVFFPNKKTSDSSTPAT
CCCCCHHHHHHCCCCCCCHHHHHHHHHEEEEEEEEECCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPP
CCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
TQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEE
CCCEEEEECCCCHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEECC
GYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEYKAPTPVHGGFTPMAKNAIRY
CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
YIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
HHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIK
EEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
RFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIP
HHHHHCCCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHCCC
GITDQNTLAEFWNHPTPPDKELFHAYRMYHLNVTQINGNFYSQVFFPNKKTSDSSTPAT
CCCCCHHHHHHCCCCCCCHHHHHHHHHEEEEEEEEECCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]