| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is thrS [H]
Identifier: 161524952
GI number: 161524952
Start: 1966751
End: 1968658
Strand: Reverse
Name: thrS [H]
Synonym: Bmul_1779
Alternate gene names: 161524952
Gene position: 1968658-1966751 (Counterclockwise)
Preceding gene: 161524953
Following gene: 161524951
Centisome position: 57.09
GC content: 61.79
Gene sequence:
>1908_bases ATGGTTTCGATACGCTTGCCTGACGGGTCAGTTCGACAATACGAGCATCCGGTGACGGTCGCCGAAGTGGCGGCGTCGAT CGGTCCCGGCCTTGCGAAGGCTGCGCTCGGCGGCAAGCTGGACGGCGAACTCGTGGATACGTCCGCCGTCATCGATCACG ACGCATCGCTCGCGATCGTCACCGACAAGGATCCGGACGGTCTCGACATCATCCGTCACTCGACCGCGCACTTGCTGGCC TATGCGGTGAAGGAGCTCTATCCGGACGCGCAGGTCACGATCGGGCCGGTCATCGACAACGGCTTCTACTACGATTTCGC GTACCACCGCCCGTTCACGCCCGAAGATCTGGAAAAGATCGAGAAGCGGATGCAGGAGCTCGCGAAGAAGGACGAGCCCG TCACGCGCCGTGTCGTGTCGCGCGACGAGGCGGCCGGCTACTTCCGCAGCATCGGCGAAAAGTACAAGGCCGAGATCATC GAGTCGATTCCGGAGAGCGACGAAATCAAGCTTTACTCGCACGGCGGCTTTACCGACCTGTGTCGCGGCCCGCACGTGCC GTCGACCGGCAAGCTGAAGGTCTTCAAGCTGATGAAGGTGGCCGGCGCGTACTGGCGCGGCGACTCGAAGAACGAGCAGC TGCAGCGCATTTACGGTACCGCGTGGACCAAGAAGGAAGATCAGGACCAGTACCTGCACATGCTCGAGGAAGCCGAGAAG CGCGATCACCGCAAGCTCGGCAAGCAGCTCGACCTGTTCCATATGCAGGAAGAGTCGCCCGGCATGGTGTTCTGGCACCC GAAGGGCTGGGCATTGTGGCAGCAGGTCGAGCAGTACATGCGCCGCCGCGTGAACGAAGCCGGCTATCTCGAGATCAAGA CGCCGATGATCATGGACCGCTCGCTCTGGGAAGCGTCCGGTCACTGGCAGAACTATCGCGAGAACATGTTCACGACCGAG TCGGAGAAGCGCGACTACGCGATCAAGCCGATGAACTGCCCCGGTCACGTGCAGGTGTTCAAGCACGGCCTGCGCTCGTA TCGCGACCTGCCGCTGCGCTACGCGGAATTCGGCTCGTGCCACCGCAACGAGGCATCGGGCGCGCTGCACGGGCTGATGC GCGTACGCGGCTTCGTGCAGGACGACGCGCACATCTTCTGTACCGAAGAGCAGATCATTGCCGAGTCGATCGCGTTCAAC AAGCTCGCGATGAGCGTCTATCGCGATTTCGGGTTCGATCACATCGACATCAAGCTGTCGCTGCGTCCCGAGCAGCGCAT GGGTTCCGATGAAACCTGGGACCGTGCGGAGCAAGGCCTGCGCGAAGCGCTGACCGCCTGCGGCCTGCAATGGGAAGAGC TGCCAGGCGAGGGTGCGTTCTACGGTCCGAAGATCGAGTACCACATCAAGGATGCGCTCGGCCGTTCGTGGCAGTGCGGC ACGCTGCAGCTCGACATGATGCTGCCGGAGCGTCTCGGCGCCGAGTACGTCGCGGAAGACAACAGCCGCCGCCGCCCGGT CATGCTGCACCGTGCGATCGTCGGTTCGATGGAGCGCTTCCTCGGCATTCTGATCGAGCACCATGCGGGTGCAATGCCGG TCTGGCTCGCGCCGGTGCAGGCCGTTGTGCTCAATATCGCCGAAAGTCAGGTCGAATATGCGCAGTCTCTGGCCCAAACG TTGCAAAAACAAGGGCTTAGAGTGACGGCCGATTTGCGCAACGAGAAGATTAGCTATAAAATACGCGAGCACACGCTGGA AAAGGTGCCTTATCTGCTCGTCGTGGGCGACAAGGAGCGTGATGCACAAACGGTAGCCGTGCGTGCCCGTGGCGGCGTCG ATCTTGGCGTTATGCCGGTCGAAGCCTTCGTTGAGCGTCTGCAGGAAGACCTGCGCTCGTTCAAGTAA
Upstream 100 bases:
>100_bases CGAAAGCGGGGCCGCATTTTTTTTGTCGCGAAATTTTCGCGTGCGACGTGCGTCGTGCGCCTTTGGTCTGCCGCCCACGG TCGGCATCACGGAGAGTGCT
Downstream 100 bases:
>100_bases CCACCCTGGCAGCGCGGCTCGTTTTTTTAATTTTTAGAGGAAACGTAACATCGCTACTGATAAGTCGTCGCATCGCATCA ACGGTGAAATCACTGCGCCG
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIVTDKDPDGLDIIRHSTAHLLA YAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKIEKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEII ESIPESDEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTE SEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQIIAESIAFN KLAMSVYRDFGFDHIDIKLSLRPEQRMGSDETWDRAEQGLREALTACGLQWEELPGEGAFYGPKIEYHIKDALGRSWQCG TLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPVQAVVLNIAESQVEYAQSLAQT LQKQGLRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQEDLRSFK
Sequences:
>Translated_635_residues MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIVTDKDPDGLDIIRHSTAHLLA YAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKIEKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEII ESIPESDEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTE SEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQIIAESIAFN KLAMSVYRDFGFDHIDIKLSLRPEQRMGSDETWDRAEQGLREALTACGLQWEELPGEGAFYGPKIEYHIKDALGRSWQCG TLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPVQAVVLNIAESQVEYAQSLAQT LQKQGLRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQEDLRSFK >Mature_635_residues MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIVTDKDPDGLDIIRHSTAHLLA YAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKIEKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEII ESIPESDEIKLYSHGGFTDLCRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDRSLWEASGHWQNYRENMFTTE SEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSCHRNEASGALHGLMRVRGFVQDDAHIFCTEEQIIAESIAFN KLAMSVYRDFGFDHIDIKLSLRPEQRMGSDETWDRAEQGLREALTACGLQWEELPGEGAFYGPKIEYHIKDALGRSWQCG TLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPVQAVVLNIAESQVEYAQSLAQT LQKQGLRVTADLRNEKISYKIREHTLEKVPYLLVVGDKERDAQTVAVRARGGVDLGVMPVEAFVERLQEDLRSFK
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38570111, Length=632, Percent_Identity=39.873417721519, Blast_Score=479, Evalue=1e-135, Organism=Homo sapiens, GI38202255, Length=638, Percent_Identity=39.0282131661442, Blast_Score=461, Evalue=1e-130, Organism=Homo sapiens, GI20070344, Length=651, Percent_Identity=37.6344086021505, Blast_Score=413, Evalue=1e-115, Organism=Escherichia coli, GI1788013, Length=634, Percent_Identity=59.7791798107255, Blast_Score=796, Evalue=0.0, Organism=Escherichia coli, GI1786392, Length=158, Percent_Identity=26.5822784810127, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71984184, Length=631, Percent_Identity=38.1933438985737, Blast_Score=472, Evalue=1e-133, Organism=Caenorhabditis elegans, GI71984192, Length=631, Percent_Identity=38.1933438985737, Blast_Score=471, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6322112, Length=654, Percent_Identity=38.5321100917431, Blast_Score=463, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6322654, Length=396, Percent_Identity=39.6464646464646, Blast_Score=306, Evalue=6e-84, Organism=Drosophila melanogaster, GI24583842, Length=631, Percent_Identity=39.7781299524564, Blast_Score=486, Evalue=1e-137, Organism=Drosophila melanogaster, GI28574141, Length=631, Percent_Identity=39.7781299524564, Blast_Score=486, Evalue=1e-137, Organism=Drosophila melanogaster, GI24583839, Length=631, Percent_Identity=39.7781299524564, Blast_Score=485, Evalue=1e-137,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 72419; Mature: 72419
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIV CEEEECCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCEECCHHEEECCCCEEEE TDKDPDGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKI ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHH EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH CRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR HHHHHHCCCCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCH SLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSC HHHHCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC HRNEASGALHGLMRVRGFVQDDAHIFCTEEQIIAESIAFNKLAMSVYRDFGFDHIDIKLS CCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE LRPEQRMGSDETWDRAEQGLREALTACGLQWEELPGEGAFYGPKIEYHIKDALGRSWQCG ECCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEECCEEEEEEHHHCCCCCCCC TLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPVQ CEEEEECCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AVVLNIAESQVEYAQSLAQTLQKQGLRVTADLRNEKISYKIREHTLEKVPYLLVVGDKER HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHCCEEEEECCCCC DAQTVAVRARGGVDLGVMPVEAFVERLQEDLRSFK CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSIRLPDGSVRQYEHPVTVAEVAASIGPGLAKAALGGKLDGELVDTSAVIDHDASLAIV CEEEECCCCCCHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCEECCHHEEECCCCEEEE TDKDPDGLDIIRHSTAHLLAYAVKELYPDAQVTIGPVIDNGFYYDFAYHRPFTPEDLEKI ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHH EKRMQELAKKDEPVTRRVVSRDEAAGYFRSIGEKYKAEIIESIPESDEIKLYSHGGFTDL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH CRGPHVPSTGKLKVFKLMKVAGAYWRGDSKNEQLQRIYGTAWTKKEDQDQYLHMLEEAEK HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RDHRKLGKQLDLFHMQEESPGMVFWHPKGWALWQQVEQYMRRRVNEAGYLEIKTPMIMDR HHHHHHCCCCCCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHCH SLWEASGHWQNYRENMFTTESEKRDYAIKPMNCPGHVQVFKHGLRSYRDLPLRYAEFGSC HHHHCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC HRNEASGALHGLMRVRGFVQDDAHIFCTEEQIIAESIAFNKLAMSVYRDFGFDHIDIKLS CCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE LRPEQRMGSDETWDRAEQGLREALTACGLQWEELPGEGAFYGPKIEYHIKDALGRSWQCG ECCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCEECCEEEEEEHHHCCCCCCCC TLQLDMMLPERLGAEYVAEDNSRRRPVMLHRAIVGSMERFLGILIEHHAGAMPVWLAPVQ CEEEEECCHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AVVLNIAESQVEYAQSLAQTLQKQGLRVTADLRNEKISYKIREHTLEKVPYLLVVGDKER HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHCCEEEEECCCCC DAQTVAVRARGGVDLGVMPVEAFVERLQEDLRSFK CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA