| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is relA [H]
Identifier: 161524953
GI number: 161524953
Start: 1969167
End: 1971401
Strand: Reverse
Name: relA [H]
Synonym: Bmul_1780
Alternate gene names: 161524953
Gene position: 1971401-1969167 (Counterclockwise)
Preceding gene: 161524954
Following gene: 161524952
Centisome position: 57.17
GC content: 68.9
Gene sequence:
>2235_bases ATGACCGAGTCCGTATCCGCTTCCTCCGTCGCGGCGCCGTCGTTCGACGACGTGCTCGCGTTCGTGCGCGAGCGGGCCGG CGACGCGTGTCTCGCGTCGGGCGAGCGGCTTGCCGATCACGCGGCCGGCACCGCGGCGATCATGCGCACGCTGAATGTCG ATCCGCCCGCGATGCAGGCGGCCGCGCTGTTCGCGCTGACGCCGCATCTGAGCGACCCCGAACGCGAACTGACGGAGCGC TTCGGCGACGAAGTCGCGCGGCTCGTGGCCGACGTGCGCAAGCTGTTGCGGCTCGGCACTGTCAGCCTGCGCGCGGCGCA GCACGCGGCGCCCGAGGCGGGCCGCGATGCGGCCCAGCAGCGGCGCGCGCAGATCGAGGCGCTGCGCAAGATGCTGCTCG CGTTCGCGCAGGACATCCGCGTCGTGCTGATCCGGCTCGCGTCGCGGCTGCAGTCGCTGCGCTACTACGCGGCGGCGAAG CTGGAACCGCCGCCGGAAGTCGCGCGCGAGACGCTCGAGATCTATGCGCCGCTCGCGAACCGCCTCGGCATCTGGCAACT GAAGTGGGAGCTCGAGGATCTCGCGTTCCGCTTCGAGGATCCGATCACCTACAAGCGCATCGCCAAGCTGCTCGACGAGA AGCGCGCGGAGCGCGAGGCGTACGTCGCGCAGGCGATCGAGCGGCTGCAGCAGGAACTCGCCGCCGCGAACGTGCAGGCC GACGTCAGCGGCCGGCCGAAGCACATCTACAGCATCTGGCGCAAGATGCGCGGCAAGGAGCTCGATTTTTCCGAGCTGTA CGACGTGCGTGCGTTCCGCGTGATCGTGCCGGACATCAAGGATTGCTACGCGGTGCTCGGCATCGTGCACCATCTGTGGC AGCCGGTGCCGAAGGAATTCGACGACTATATCTCGCGACCGAAGCCGAACGGCTACAAGTCGCTGCATACGGTCGTGATC GGCGACGACGGCCGCGCCTTCGAGGTACAGATCCGCACGCAGGAAATGCATCGCTTTGCCGAATACGGCGTGGCCGCGCA CTGGCGCTACAAGGAGGCCGGCACGCGCGGCTACGGCGGCCAGTTCTCGGCGAGCGACAAGTACGACGAGAAGATCGCGT GGCTGCGTCAGCTGCTCGCGTGGAAGGACGACGTCGAGGATGGCGCCGAGCAGTCGGGCGACAAGGCGTGGGCGCAGCTG CGCGAGACCTCGCTCGACGATGACCACATCTACGTGCTGACGCCGCAGGCGCGCGTGATCGCGCTGCCGCAGGGCGCGAC GCCGGTCGACTTCGCGTATCACCTGCACAGCGAACTCGGCCATCGCTGCCGCGGCGCGCGCGTCGACGGCGCGATGGTGC CGCTCAACACGCCGCTCGCGAACGGCCAGACGGTCGAGATCGTCGCGGTGAAGGAGGGCGGCCCGTCGCGCGACTGGCTC AACCCGCAGCTCGGCTATCTGAAGAGCCCGCGTGCACGCCAGAAGGTGCGCGCGTGGTTCAACGCGATCGAGCAGGAAGA GAACATCGCGCACGGTCGTGCGCTCGTCGAAAAGACGCTGCAGCGCGAAGGCAAGACGTCGGTGAGTCTCGACAGCCTTG CCGCGAAGCTCGGCTTCAAGTCGCCCGAAGAGCTGTTCTCGGTCGTCGGCAAGGAAGAGTTCAGCCTGCGCAACATCGAG CAGGCATTGTCCGACGCGCCGCCCGCCGAGCCGGCGCCCGAGGCGCCCGCCGATTTCGAGAAGCGCAGCAGCGGCGCGAG CGTCGCGCACGGCGCCTCGACGGGCGTGCTCGTGGTCGGCGTCGATGCGCTGCTCACGCAGCTCGCGCGCTGTTGCCGGC CGGCGCCGCCGGATCCGATCAGCGGGTTCGTCACGCGCGGCAAGGGCATGTCGATTCACCGCAGCGACTGCGCGACGTTC CGCCGGATGGCCGAGCGCGCGCCCGAACGCGTGCTGCACACCACGTGGTCGGCCGACGTGCTCGGCGGCCGCGGCGCGTC CGTCTATCCGGTCGACCTGATGATCGAGGCGACCGATCGGCAGGGCTTGCTGCGCGACATTTCCGAAGTCTTCGCGCGCG AGAAGATGAACGTGGTCGGCGTGAAGACGCAGAGCCGCCGCAATACAGCCTTCATGCAGTTCACGGTCGAGGTGTCGAAT TCGGCGCAGGTGCAGCGCGCCTGCACGCTGCTCGGCGAAGTGCAGGGCGTCGTGCGGGCGGGGCGTAAGGCGTAA
Upstream 100 bases:
>100_bases GCGAAGCTCGCCGATCCGGCGCTGCTCGTCGAGATCGTGGTCGTCGCCGCGCAGCGGAGCTGATCCGCGTCGAGATGACC GTATTCCGTCAGGCCGTGCG
Downstream 100 bases:
>100_bases GGCGGCGATCACGCGAAACGGGGCGCGATCGCTTGCTGTTTCGGTTCACCGCTACGGTTCACCGCTACGGCTTGCCGCTC CGGCCGCCGCCGCGGTTTTC
Product: (p)ppGpp synthetase I SpoT/RelA
Products: NA
Alternate protein names: (p)ppGpp synthase; ATP:GTP 3'-pyrophosphotransferase; ppGpp synthase I [H]
Number of amino acids: Translated: 744; Mature: 743
Protein sequence:
>744_residues MTESVSASSVAAPSFDDVLAFVRERAGDACLASGERLADHAAGTAAIMRTLNVDPPAMQAAALFALTPHLSDPERELTER FGDEVARLVADVRKLLRLGTVSLRAAQHAAPEAGRDAAQQRRAQIEALRKMLLAFAQDIRVVLIRLASRLQSLRYYAAAK LEPPPEVARETLEIYAPLANRLGIWQLKWELEDLAFRFEDPITYKRIAKLLDEKRAEREAYVAQAIERLQQELAAANVQA DVSGRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPKEFDDYISRPKPNGYKSLHTVVI GDDGRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGTRGYGGQFSASDKYDEKIAWLRQLLAWKDDVEDGAEQSGDKAWAQL RETSLDDDHIYVLTPQARVIALPQGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTPLANGQTVEIVAVKEGGPSRDWL NPQLGYLKSPRARQKVRAWFNAIEQEENIAHGRALVEKTLQREGKTSVSLDSLAAKLGFKSPEELFSVVGKEEFSLRNIE QALSDAPPAEPAPEAPADFEKRSSGASVAHGASTGVLVVGVDALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCATF RRMAERAPERVLHTTWSADVLGGRGASVYPVDLMIEATDRQGLLRDISEVFAREKMNVVGVKTQSRRNTAFMQFTVEVSN SAQVQRACTLLGEVQGVVRAGRKA
Sequences:
>Translated_744_residues MTESVSASSVAAPSFDDVLAFVRERAGDACLASGERLADHAAGTAAIMRTLNVDPPAMQAAALFALTPHLSDPERELTER FGDEVARLVADVRKLLRLGTVSLRAAQHAAPEAGRDAAQQRRAQIEALRKMLLAFAQDIRVVLIRLASRLQSLRYYAAAK LEPPPEVARETLEIYAPLANRLGIWQLKWELEDLAFRFEDPITYKRIAKLLDEKRAEREAYVAQAIERLQQELAAANVQA DVSGRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPKEFDDYISRPKPNGYKSLHTVVI GDDGRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGTRGYGGQFSASDKYDEKIAWLRQLLAWKDDVEDGAEQSGDKAWAQL RETSLDDDHIYVLTPQARVIALPQGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTPLANGQTVEIVAVKEGGPSRDWL NPQLGYLKSPRARQKVRAWFNAIEQEENIAHGRALVEKTLQREGKTSVSLDSLAAKLGFKSPEELFSVVGKEEFSLRNIE QALSDAPPAEPAPEAPADFEKRSSGASVAHGASTGVLVVGVDALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCATF RRMAERAPERVLHTTWSADVLGGRGASVYPVDLMIEATDRQGLLRDISEVFAREKMNVVGVKTQSRRNTAFMQFTVEVSN SAQVQRACTLLGEVQGVVRAGRKA >Mature_743_residues TESVSASSVAAPSFDDVLAFVRERAGDACLASGERLADHAAGTAAIMRTLNVDPPAMQAAALFALTPHLSDPERELTERF GDEVARLVADVRKLLRLGTVSLRAAQHAAPEAGRDAAQQRRAQIEALRKMLLAFAQDIRVVLIRLASRLQSLRYYAAAKL EPPPEVARETLEIYAPLANRLGIWQLKWELEDLAFRFEDPITYKRIAKLLDEKRAEREAYVAQAIERLQQELAAANVQAD VSGRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPKEFDDYISRPKPNGYKSLHTVVIG DDGRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGTRGYGGQFSASDKYDEKIAWLRQLLAWKDDVEDGAEQSGDKAWAQLR ETSLDDDHIYVLTPQARVIALPQGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTPLANGQTVEIVAVKEGGPSRDWLN PQLGYLKSPRARQKVRAWFNAIEQEENIAHGRALVEKTLQREGKTSVSLDSLAAKLGFKSPEELFSVVGKEEFSLRNIEQ ALSDAPPAEPAPEAPADFEKRSSGASVAHGASTGVLVVGVDALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCATFR RMAERAPERVLHTTWSADVLGGRGASVYPVDLMIEATDRQGLLRDISEVFAREKMNVVGVKTQSRRNTAFMQFTVEVSNS AQVQRACTLLGEVQGVVRAGRKA
Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the formation of pppGpp which i
COG id: COG0317
COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1789147, Length=706, Percent_Identity=40.7932011331445, Blast_Score=536, Evalue=1e-153, Organism=Escherichia coli, GI1790082, Length=728, Percent_Identity=33.6538461538462, Blast_Score=387, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR012675 - InterPro: IPR007685 - InterPro: IPR004811 - InterPro: IPR004095 - InterPro: IPR012676 [H]
Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]
EC number: =2.7.6.5 [H]
Molecular weight: Translated: 82462; Mature: 82330
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESVSASSVAAPSFDDVLAFVRERAGDACLASGERLADHAAGTAAIMRTLNVDPPAMQA CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH AALFALTPHLSDPERELTERFGDEVARLVADVRKLLRLGTVSLRAAQHAAPEAGRDAAQQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RRAQIEALRKMLLAFAQDIRVVLIRLASRLQSLRYYAAAKLEPPPEVARETLEIYAPLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RLGIWQLKWELEDLAFRFEDPITYKRIAKLLDEKRAEREAYVAQAIERLQQELAAANVQA CCCEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DVSGRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPKEF CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCHHH DDYISRPKPNGYKSLHTVVIGDDGRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGTRGYGG HHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHEEEEHHCCCCCCCC QFSASDKYDEKIAWLRQLLAWKDDVEDGAEQSGDKAWAQLRETSLDDDHIYVLTPQARVI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCEEE ALPQGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTPLANGQTVEIVAVKEGGPSRDWL EECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCC NPQLGYLKSPRARQKVRAWFNAIEQEENIAHGRALVEKTLQREGKTSVSLDSLAAKLGFK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC SPEELFSVVGKEEFSLRNIEQALSDAPPAEPAPEAPADFEKRSSGASVAHGASTGVLVVG CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEECCCCCCEEEEE VDALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCATFRRMAERAPERVLHTTWSADV HHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC LGGRGASVYPVDLMIEATDRQGLLRDISEVFAREKMNVVGVKTQSRRNTAFMQFTVEVSN CCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEEECC SAQVQRACTLLGEVQGVVRAGRKA CHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TESVSASSVAAPSFDDVLAFVRERAGDACLASGERLADHAAGTAAIMRTLNVDPPAMQA CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHH AALFALTPHLSDPERELTERFGDEVARLVADVRKLLRLGTVSLRAAQHAAPEAGRDAAQQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RRAQIEALRKMLLAFAQDIRVVLIRLASRLQSLRYYAAAKLEPPPEVARETLEIYAPLAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RLGIWQLKWELEDLAFRFEDPITYKRIAKLLDEKRAEREAYVAQAIERLQQELAAANVQA CCCEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DVSGRPKHIYSIWRKMRGKELDFSELYDVRAFRVIVPDIKDCYAVLGIVHHLWQPVPKEF CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCHHH DDYISRPKPNGYKSLHTVVIGDDGRAFEVQIRTQEMHRFAEYGVAAHWRYKEAGTRGYGG HHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHEEEEHHCCCCCCCC QFSASDKYDEKIAWLRQLLAWKDDVEDGAEQSGDKAWAQLRETSLDDDHIYVLTPQARVI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCEEE ALPQGATPVDFAYHLHSELGHRCRGARVDGAMVPLNTPLANGQTVEIVAVKEGGPSRDWL EECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCC NPQLGYLKSPRARQKVRAWFNAIEQEENIAHGRALVEKTLQREGKTSVSLDSLAAKLGFK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC SPEELFSVVGKEEFSLRNIEQALSDAPPAEPAPEAPADFEKRSSGASVAHGASTGVLVVG CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEECCCCCCEEEEE VDALLTQLARCCRPAPPDPISGFVTRGKGMSIHRSDCATFRRMAERAPERVLHTTWSADV HHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC LGGRGASVYPVDLMIEATDRQGLLRDISEVFAREKMNVVGVKTQSRRNTAFMQFTVEVSN CCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEEEECC SAQVQRACTLLGEVQGVVRAGRKA CHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7928955 [H]