Click here to switch to the map view.

The map label for this gene is infC [H]

Identifier: 161524951

GI number: 161524951

Start: 1966177

End: 1966647

Strand: Reverse

Name: infC [H]

Synonym: Bmul_1778

Alternate gene names: 161524951

Gene position: 1966647-1966177 (Counterclockwise)

Preceding gene: 161524952

Following gene: 161524950

Centisome position: 57.03

GC content: 56.05

Gene sequence:

>471_bases
GTGCGTCTGGTCGGAATCGAGAACGAACCGCTCGGTATCGTAAAGCTCGCTGATGCTTTCCGTAAATCGGAAGAACTGGA
TGTTGACCTGGTGGAAATCGCGCCGCAGGCGTCTCCGCCGGTTTGCCGTCTGATGGATTACGGCAAGTTCAAGTACCAGG
AAGCCAAGAAGCAGCATGAAGCGAAGCTGAAGCAGAAGGTCATCCAGGTCAAGGAAGTCAAGTTCCGGCCGGGTACCGAT
GACGGGGATTACAACGTCAAGCTTCGCAATCTCGTGCGCTTCCTTGAGGAAGGCGACAAGACGAAGATCACGTTGCGTTT
CCGCGGCCGCGAAATGGCTCACCAGGAAATCGGCATGCGGATGCTCGAGCGTCTGCGCACCGATCTCGAGGAAGTCGGCC
AGGTCGAGCAGATGCCGAAGATGGAAGGGCGCCAGATGATCATGGTGCTCTCGCCGAAAAAGAAGAAGTAA

Upstream 100 bases:

>100_bases
CCCTGGCAGCGCGGCTCGTTTTTTTAATTTTTAGAGGAAACGTAACATCGCTACTGATAAGTCGTCGCATCGCATCAACG
GTGAAATCACTGCGCCGGAA

Downstream 100 bases:

>100_bases
CGGGCCGGCGCGCAGTGGCGCGCGGGTTTCGCAGTGGTTCGGCGCGTCGCCCTGTCGGGCGGCGCGCCAGAAACGACGGC
GGCTGCATGCAGCGCGCCGT

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD
DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK

Sequences:

>Translated_156_residues
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD
DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK
>Mature_156_residues
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHEAKLKQKVIQVKEVKFRPGTD
DGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMRMLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=157, Percent_Identity=68.7898089171974, Blast_Score=207, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 18186; Mature: 18186

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHE
CEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHH
AKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMR
HHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
MLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRLVGIENEPLGIVKLADAFRKSEELDVDLVEIAPQASPPVCRLMDYGKFKYQEAKKQHE
CEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHH
AKLKQKVIQVKEVKFRPGTDDGDYNVKLRNLVRFLEEGDKTKITLRFRGREMAHQEIGMR
HHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHH
MLERLRTDLEEVGQVEQMPKMEGRQMIMVLSPKKKK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]