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The map label for this gene is ygeA [H]

Identifier: 161524302

GI number: 161524302

Start: 1238616

End: 1239308

Strand: Reverse

Name: ygeA [H]

Synonym: Bmul_1127

Alternate gene names: 161524302

Gene position: 1239308-1238616 (Counterclockwise)

Preceding gene: 161524304

Following gene: 161524301

Centisome position: 35.94

GC content: 67.68

Gene sequence:

>693_bases
ATGAAGACGATCGGACTGATCGGCGGAATGAGCTGGGAATCGTCGGCCGAATACTACCGGCTGATCAATCGCCATTCGAA
GGCGCTGCACGGCGGTCATCACAACGCGAAGAGCGTGCTCGTGACCGTCGATTTCGCCGAGATCGAGGCGCTACAGCGCG
CGCACGACTGGCCTGCGCTCGGCGAACGGATGGCCGACGCCGCGCGGCAGCTCGAAGCGGCCGGCGCCGATCTCGTCGTG
CTGACGACCAACACGATGCATCGCGTGCACGACGCGATCGAAGCGGCCGTCACGCTGCCGTTCCTGCATATCGCCGATCC
GACCGGCGCCGCGCTGCGCGACGCGGGCGTCGAGCGCGTCGCGCTGCTCGGCACGCGCTATACGATGGAACTGCCGTTCT
ACGCGCAACGGCTGCGCGAGCGCTTCGGCATCGACGTGCTCGTACCTGACGAACGCGAGCGCGCCGACGTGCACCGGATC
ATCTACGACGAGCTCTGCCACGGCATCGTCGCGCGCGAGTCGCGCGCCGCGTACGTGCGGATCATCGAATCGCTCGCGCA
ACGCGGCGCGCAGGCGGTGATTCTCGGCTGCACGGAAATCACGCTGCTGATCGGCGCCGACGATTCGCCGCTGCCGGTGT
TCGACACGACGGCACTGCATGCCAAGGCGGCCGTCGAATGGGCCGCGCGCTGA

Upstream 100 bases:

>100_bases
CGCACTGCGCCGTACCGGCCGGCTTGACGCGAAGCGTACCGCCGCGCACGCGCACCGGCCCCTATACTCGACGGCGACCA
TACGAACGAAAGGGCAACGG

Downstream 100 bases:

>100_bases
GGCAACGACGCGCAGCGGACGCACAAAACAAAAAACCCGGCACGGGGCCGGGTTCCTGTCGACGAAGCGCGCATCGGTCA
CTTGCGCTGCACATCACCTG

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKTIGLIGGMSWESSAEYYRLINRHSKALHGGHHNAKSVLVTVDFAEIEALQRAHDWPALGERMADAARQLEAAGADLVV
LTTNTMHRVHDAIEAAVTLPFLHIADPTGAALRDAGVERVALLGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRI
IYDELCHGIVARESRAAYVRIIESLAQRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR

Sequences:

>Translated_230_residues
MKTIGLIGGMSWESSAEYYRLINRHSKALHGGHHNAKSVLVTVDFAEIEALQRAHDWPALGERMADAARQLEAAGADLVV
LTTNTMHRVHDAIEAAVTLPFLHIADPTGAALRDAGVERVALLGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRI
IYDELCHGIVARESRAAYVRIIESLAQRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR
>Mature_230_residues
MKTIGLIGGMSWESSAEYYRLINRHSKALHGGHHNAKSVLVTVDFAEIEALQRAHDWPALGERMADAARQLEAAGADLVV
LTTNTMHRVHDAIEAAVTLPFLHIADPTGAALRDAGVERVALLGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRI
IYDELCHGIVARESRAAYVRIIESLAQRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=227, Percent_Identity=56.3876651982379, Blast_Score=252, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25292; Mature: 25292

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGLIGGMSWESSAEYYRLINRHSKALHGGHHNAKSVLVTVDFAEIEALQRAHDWPAL
CCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHH
GERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHIADPTGAALRDAGVERV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCEEEECCCCCHHHHHCCHHHH
ALLGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRAAYVR
HHCCCEEEEECCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IIESLAQRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR
HHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTIGLIGGMSWESSAEYYRLINRHSKALHGGHHNAKSVLVTVDFAEIEALQRAHDWPAL
CCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHH
GERMADAARQLEAAGADLVVLTTNTMHRVHDAIEAAVTLPFLHIADPTGAALRDAGVERV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCEEEECCCCCHHHHHCCHHHH
ALLGTRYTMELPFYAQRLRERFGIDVLVPDERERADVHRIIYDELCHGIVARESRAAYVR
HHCCCEEEEECCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IIESLAQRGAQAVILGCTEITLLIGADDSPLPVFDTTALHAKAAVEWAAR
HHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]