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The map label for this gene is dppB [H]

Identifier: 160903213

GI number: 160903213

Start: 1952475

End: 1953482

Strand: Direct

Name: dppB [H]

Synonym: Pmob_1782

Alternate gene names: 160903213

Gene position: 1952475-1953482 (Clockwise)

Preceding gene: 160903212

Following gene: 160903214

Centisome position: 89.99

GC content: 37.7

Gene sequence:

>1008_bases
GTGTCTCTGAGAAATTATATTATTGTGAGGATCTTGTTGGCTATTCCCATGCTTTTTGTTCTCCTAGTAGTAATATTTTT
TGTTATTAGGATAATTCCCGGAGATCCCGTTGCAGCAATGTTAGGTGGAAGAGCCTCTCAAGAAGTTATTGAAGCCAGGA
GAGCAGAATTAGGACTTAACGATCCCATATTGGTTCAATTTTTTAAATACGTAGGGGGACTGTTCAAAGGTGACTTGGGA
ACTTCAACAATGACGGGAAGGCCTGTGCTTGATGAGATCTTAGAAAGATTTCCTGCAACACTTGAATTAACGATTTTTGC
GTTTATTGTAGCAGTAGTTATAGGGGTCTTTTGGGGTTCAAAAGCTGCACAAAAAAGAGACAAACCCGTAGATATAATTG
CCAGAGGATTTTCGATGCTTATGTATGCTGTACCGGTATTTTGGTTTGGTTTGATGATGCAATTCATTTTTGGAATGCAG
TTGAAATGGCTACCTATTGCCGGAAGGATCGGCGCTACAGTGCAATTCGAAGAAATTACAGGTTTGTTTTTACTGGATTC
CCTTTTAAGAGGTAATTGGACTGCTTTTTGGGATGTTCTGCAACATTTGTTGTTACCTGGTATTACTCTTGGCCTTGTTA
TCTCAAGTATTTTTTTAAGAATGGTGAGGAATAATACAATTCTAACGTTAACCTCTGATTATGTTAAATCTGCTAAAGCA
AGGGGTATACCTGAAAATAGAATATTATACAGGCATGCTTTAAGGAACGCTTTAGTTCCTATTTTAACAGTAATGGGATT
ACAGCTCGCACTATTGATGGCTGGAGCTGTTTTAACTGAAACAACTTTTTCTTGGCCAGGGATAGGGAGTTACCTCATCA
TGAAAATCAGATACAGAGATTTTCCCGCCATTCAAGGAACGATAGTTTTTTTCGCAATTTTCGTAATTATAATTAACATC
ATAGTAGAAATTATCAACGCGTTAATAGACCCAAGAGTAAGGTACTGA

Upstream 100 bases:

>100_bases
TAAGAATTTTTTTACGTTTGAAACTAAAACAATTGCCCCGATTTTTTAAGAATCGGGGCAATTTTAAGAAAACAAACCTC
AGAAAAGAAGGGTGATCTAA

Downstream 100 bases:

>100_bases
GGAGGGTATAAAATTGGAAGAACATAAATTCATTTCATCGAAGATTGGAAAGGGCTTCTCCAGATTCTTTAGAGGTTCCA
ATGCATGGCTTACCTTCATA

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSLRNYIIVRILLAIPMLFVLLVVIFFVIRIIPGDPVAAMLGGRASQEVIEARRAELGLNDPILVQFFKYVGGLFKGDLG
TSTMTGRPVLDEILERFPATLELTIFAFIVAVVIGVFWGSKAAQKRDKPVDIIARGFSMLMYAVPVFWFGLMMQFIFGMQ
LKWLPIAGRIGATVQFEEITGLFLLDSLLRGNWTAFWDVLQHLLLPGITLGLVISSIFLRMVRNNTILTLTSDYVKSAKA
RGIPENRILYRHALRNALVPILTVMGLQLALLMAGAVLTETTFSWPGIGSYLIMKIRYRDFPAIQGTIVFFAIFVIIINI
IVEIINALIDPRVRY

Sequences:

>Translated_335_residues
MSLRNYIIVRILLAIPMLFVLLVVIFFVIRIIPGDPVAAMLGGRASQEVIEARRAELGLNDPILVQFFKYVGGLFKGDLG
TSTMTGRPVLDEILERFPATLELTIFAFIVAVVIGVFWGSKAAQKRDKPVDIIARGFSMLMYAVPVFWFGLMMQFIFGMQ
LKWLPIAGRIGATVQFEEITGLFLLDSLLRGNWTAFWDVLQHLLLPGITLGLVISSIFLRMVRNNTILTLTSDYVKSAKA
RGIPENRILYRHALRNALVPILTVMGLQLALLMAGAVLTETTFSWPGIGSYLIMKIRYRDFPAIQGTIVFFAIFVIIINI
IVEIINALIDPRVRY
>Mature_334_residues
SLRNYIIVRILLAIPMLFVLLVVIFFVIRIIPGDPVAAMLGGRASQEVIEARRAELGLNDPILVQFFKYVGGLFKGDLGT
STMTGRPVLDEILERFPATLELTIFAFIVAVVIGVFWGSKAAQKRDKPVDIIARGFSMLMYAVPVFWFGLMMQFIFGMQL
KWLPIAGRIGATVQFEEITGLFLLDSLLRGNWTAFWDVLQHLLLPGITLGLVISSIFLRMVRNNTILTLTSDYVKSAKAR
GIPENRILYRHALRNALVPILTVMGLQLALLMAGAVLTETTFSWPGIGSYLIMKIRYRDFPAIQGTIVFFAIFVIIINII
VEIINALIDPRVRY

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=335, Percent_Identity=37.6119402985075, Blast_Score=250, Evalue=1e-67,
Organism=Escherichia coli, GI1787053, Length=331, Percent_Identity=34.7432024169184, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1787761, Length=314, Percent_Identity=41.7197452229299, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1787550, Length=265, Percent_Identity=35.8490566037736, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789888, Length=334, Percent_Identity=31.437125748503, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI1787497, Length=333, Percent_Identity=31.8318318318318, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI1788504, Length=379, Percent_Identity=25.8575197889182, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37568; Mature: 37437

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRNYIIVRILLAIPMLFVLLVVIFFVIRIIPGDPVAAMLGGRASQEVIEARRAELGLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCC
DPILVQFFKYVGGLFKGDLGTSTMTGRPVLDEILERFPATLELTIFAFIVAVVIGVFWGS
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
KAAQKRDKPVDIIARGFSMLMYAVPVFWFGLMMQFIFGMQLKWLPIAGRIGATVQFEEIT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHH
GLFLLDSLLRGNWTAFWDVLQHLLLPGITLGLVISSIFLRMVRNNTILTLTSDYVKSAKA
HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH
RGIPENRILYRHALRNALVPILTVMGLQLALLMAGAVLTETTFSWPGIGSYLIMKIRYRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEHHCC
FPAIQGTIVFFAIFVIIINIIVEIINALIDPRVRY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLRNYIIVRILLAIPMLFVLLVVIFFVIRIIPGDPVAAMLGGRASQEVIEARRAELGLN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCC
DPILVQFFKYVGGLFKGDLGTSTMTGRPVLDEILERFPATLELTIFAFIVAVVIGVFWGS
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
KAAQKRDKPVDIIARGFSMLMYAVPVFWFGLMMQFIFGMQLKWLPIAGRIGATVQFEEIT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHH
GLFLLDSLLRGNWTAFWDVLQHLLLPGITLGLVISSIFLRMVRNNTILTLTSDYVKSAKA
HHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHH
RGIPENRILYRHALRNALVPILTVMGLQLALLMAGAVLTETTFSWPGIGSYLIMKIRYRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEHHCC
FPAIQGTIVFFAIFVIIINIIVEIINALIDPRVRY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]