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The map label for this gene is dppC [H]

Identifier: 160903214

GI number: 160903214

Start: 1953496

End: 1954371

Strand: Direct

Name: dppC [H]

Synonym: Pmob_1783

Alternate gene names: 160903214

Gene position: 1953496-1954371 (Clockwise)

Preceding gene: 160903213

Following gene: 160903215

Centisome position: 90.04

GC content: 39.61

Gene sequence:

>876_bases
TTGGAAGAACATAAATTCATTTCATCGAAGATTGGAAAGGGCTTCTCCAGATTCTTTAGAGGTTCCAATGCATGGCTTAC
CTTCATAGGTATGGTTATTTTAATTTTTTACATTTTTTTAGCCATTTTTTCACCTCAAATAGCTCCTTACGACCCTACAG
AAAGGGTTGGAAGATCTTTAACCCCTCCGAGTAATGAATTTTGGTTTGGAACAGACAACCTCGGTAGGGACGTATTTAGT
AGGGTTGTTTATGGGGCTAGAATAGCCTTAACAATAGCTTTTGTTTCTGTGGCAATAGCTTCTGCTATTGGTATACCGTT
AGGTTTATTATCTGGATTTGTGGGCGGAATATTCGATAGAATAATGACCATAGTTATGGATGCTATATATTCTTTTCCAG
GTTTGATTCTTGCCATAGCGATAGCTGCATTTTTAGGACCAGGTATTATGAATATCGCTATTTCAATAGCCGTTGTTTAC
ATACCCACATACTTTAGGGTAATTAGGAATCAAGTATCTTCAGTAAAAAATGAACTTTATGTCGATGGTGCAAGGGCTAT
AGGCGCTTCGAACTTGTCTATTTTGGGAAGGTATATACTTCCAAATGTGCTTCCGTCCGTTGTGGTTGTGCTTTCTATGA
ACCTAGCAGACGCCATAATGACAGAAGCTGGACTAAGCTTTTTGGGATTAGGCATAGCTCCTCCAACTCCCGATTGGGGT
TTTGATTTAAGTAACGGTCAAAGATTCATTTTGAGTGGTGCTTGGTGGGCTTTGACGTTTCCCGGTGTTGCTATAATGAC
TGTTACACTAGGATTTTCCATGTTCAGCGAAGGGTTGAACGAGATGCTGAATCCAACAATTAGGGAAAGAAGGTAG

Upstream 100 bases:

>100_bases
ATAGTTTTTTTCGCAATTTTCGTAATTATAATTAACATCATAGTAGAAATTATCAACGCGTTAATAGACCCAAGAGTAAG
GTACTGAGGAGGGTATAAAA

Downstream 100 bases:

>100_bases
TAAGAGTGCTTGAAGTGAAAAATCTGAAAGTTTATTATAAAAGTGAAGAAGGGATTATAAAAGCGGTTGACGATGTTAGT
TTTAAGGTAAAAGACGGAGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MEEHKFISSKIGKGFSRFFRGSNAWLTFIGMVILIFYIFLAIFSPQIAPYDPTERVGRSLTPPSNEFWFGTDNLGRDVFS
RVVYGARIALTIAFVSVAIASAIGIPLGLLSGFVGGIFDRIMTIVMDAIYSFPGLILAIAIAAFLGPGIMNIAISIAVVY
IPTYFRVIRNQVSSVKNELYVDGARAIGASNLSILGRYILPNVLPSVVVVLSMNLADAIMTEAGLSFLGLGIAPPTPDWG
FDLSNGQRFILSGAWWALTFPGVAIMTVTLGFSMFSEGLNEMLNPTIRERR

Sequences:

>Translated_291_residues
MEEHKFISSKIGKGFSRFFRGSNAWLTFIGMVILIFYIFLAIFSPQIAPYDPTERVGRSLTPPSNEFWFGTDNLGRDVFS
RVVYGARIALTIAFVSVAIASAIGIPLGLLSGFVGGIFDRIMTIVMDAIYSFPGLILAIAIAAFLGPGIMNIAISIAVVY
IPTYFRVIRNQVSSVKNELYVDGARAIGASNLSILGRYILPNVLPSVVVVLSMNLADAIMTEAGLSFLGLGIAPPTPDWG
FDLSNGQRFILSGAWWALTFPGVAIMTVTLGFSMFSEGLNEMLNPTIRERR
>Mature_291_residues
MEEHKFISSKIGKGFSRFFRGSNAWLTFIGMVILIFYIFLAIFSPQIAPYDPTERVGRSLTPPSNEFWFGTDNLGRDVFS
RVVYGARIALTIAFVSVAIASAIGIPLGLLSGFVGGIFDRIMTIVMDAIYSFPGLILAIAIAAFLGPGIMNIAISIAVVY
IPTYFRVIRNQVSSVKNELYVDGARAIGASNLSILGRYILPNVLPSVVVVLSMNLADAIMTEAGLSFLGLGIAPPTPDWG
FDLSNGQRFILSGAWWALTFPGVAIMTVTLGFSMFSEGLNEMLNPTIRERR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=262, Percent_Identity=40.8396946564886, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1787054, Length=276, Percent_Identity=41.304347826087, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1789964, Length=259, Percent_Identity=38.6100386100386, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=29.5833333333333, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787549, Length=274, Percent_Identity=32.1167883211679, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787498, Length=273, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=29.8245614035088, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31653; Mature: 31653

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEHKFISSKIGKGFSRFFRGSNAWLTFIGMVILIFYIFLAIFSPQIAPYDPTERVGRSL
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
TPPSNEFWFGTDNLGRDVFSRVVYGARIALTIAFVSVAIASAIGIPLGLLSGFVGGIFDR
CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMTIVMDAIYSFPGLILAIAIAAFLGPGIMNIAISIAVVYIPTYFRVIRNQVSSVKNELY
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDGARAIGASNLSILGRYILPNVLPSVVVVLSMNLADAIMTEAGLSFLGLGIAPPTPDWG
HCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC
FDLSNGQRFILSGAWWALTFPGVAIMTVTLGFSMFSEGLNEMLNPTIRERR
CCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MEEHKFISSKIGKGFSRFFRGSNAWLTFIGMVILIFYIFLAIFSPQIAPYDPTERVGRSL
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
TPPSNEFWFGTDNLGRDVFSRVVYGARIALTIAFVSVAIASAIGIPLGLLSGFVGGIFDR
CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMTIVMDAIYSFPGLILAIAIAAFLGPGIMNIAISIAVVYIPTYFRVIRNQVSSVKNELY
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDGARAIGASNLSILGRYILPNVLPSVVVVLSMNLADAIMTEAGLSFLGLGIAPPTPDWG
HCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCC
FDLSNGQRFILSGAWWALTFPGVAIMTVTLGFSMFSEGLNEMLNPTIRERR
CCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]