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The map label for this gene is ytsP [H]

Identifier: 160902008

GI number: 160902008

Start: 584430

End: 585377

Strand: Direct

Name: ytsP [H]

Synonym: Pmob_0532

Alternate gene names: 160902008

Gene position: 584430-585377 (Clockwise)

Preceding gene: 160902006

Following gene: 160902009

Centisome position: 26.94

GC content: 31.96

Gene sequence:

>948_bases
ATGAGAAGCGTTTTTAGAGATTTTACTGATTATTTTTTTGAAGTATTGACTTATCCAAAAGAAAAATGGAATTTATTTTG
GCAAGACTACAAGAGAACTTTAGATTTTATAAATCTTTATCAAGAAAAAAAAGGTATCAAAGATGATGAAATTGTTGAAA
AGTTTAAAAAAATTGGAAGAAGGGAACTTGACAGGGCTTTTTGGTACAAGCAAGAAATCATAAAAGATTTAAAAGCTGAT
ATCATCAAGGACCTGACAAAATCCTCTGAAAAGTTTCAAGTTGACAGGGGAGATTATGCGGTTTATTTAACTGTGTTCAC
AGGTGATAGCCCTTACGAATTTTTAGAATCATTCATAGGAACCATAATTGGTATAGATATACTTTATTTTTATTTCAACA
GGGATAAGATCGACCCAAAAACCCTAATAGAAGAAGCAATAATGAAATTCATTAATTCTACACCACCCAATAAGAAAAAA
GCTGACTTCTGGATTTTATACGATAAAATTAAAACCCTTATCAGTGACAAAAATTATAACGATAAGCAGAGCATTTTAAA
ATTAATTTCTCAATTGTTAGCTGAAAGGATACCTTATTATAATTGGGTGGGTTTTTACCTAGTCGATGAGACAGAAGATA
ATTCTCTTGTATTAGGACCTTTTGTTGGAGAGCCAACAGAACATACAAAAATAAAGTTTGGACAAGGTATCTGTGGGCAA
GCAGCAAGTACAAAAACGACCTTCGTTGTTGATGATGTTAGCAAAGAGGATAACTATCTTTCATGCAGCCCAAAAACACA
GTCAGAAATCGTTGTTCCCATATTTGATAAAAATGGCAATATTGTTGGTGAAATAGATATTGATAGTCATGAAAAAGCCC
CTTTTGATCAAGACGATCGATCTTTTTTGGAGGCTATTGCCAAATTACTTTCTGAAAGATTTTGGTAA

Upstream 100 bases:

>100_bases
GAAGCCCGTTTCTTCAGAAAAGGTGATTTTTTATTTTATGATTCAATTTTGATATAATTTAAATAATTGTTGGAAAATCA
AAAGGAGGTCCATTGTATTA

Downstream 100 bases:

>100_bases
ATAATAAATAAGGTGATTCTGTGAATATAGATAAAATTAAACAAATTTTTAAAGATTATTCTCCAAAACCTATAGGAGTA
GAAAATTGTTTTTCAGTGTT

Product: putative GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRSVFRDFTDYFFEVLTYPKEKWNLFWQDYKRTLDFINLYQEKKGIKDDEIVEKFKKIGRRELDRAFWYKQEIIKDLKAD
IIKDLTKSSEKFQVDRGDYAVYLTVFTGDSPYEFLESFIGTIIGIDILYFYFNRDKIDPKTLIEEAIMKFINSTPPNKKK
ADFWILYDKIKTLISDKNYNDKQSILKLISQLLAERIPYYNWVGFYLVDETEDNSLVLGPFVGEPTEHTKIKFGQGICGQ
AASTKTTFVVDDVSKEDNYLSCSPKTQSEIVVPIFDKNGNIVGEIDIDSHEKAPFDQDDRSFLEAIAKLLSERFW

Sequences:

>Translated_315_residues
MRSVFRDFTDYFFEVLTYPKEKWNLFWQDYKRTLDFINLYQEKKGIKDDEIVEKFKKIGRRELDRAFWYKQEIIKDLKAD
IIKDLTKSSEKFQVDRGDYAVYLTVFTGDSPYEFLESFIGTIIGIDILYFYFNRDKIDPKTLIEEAIMKFINSTPPNKKK
ADFWILYDKIKTLISDKNYNDKQSILKLISQLLAERIPYYNWVGFYLVDETEDNSLVLGPFVGEPTEHTKIKFGQGICGQ
AASTKTTFVVDDVSKEDNYLSCSPKTQSEIVVPIFDKNGNIVGEIDIDSHEKAPFDQDDRSFLEAIAKLLSERFW
>Mature_315_residues
MRSVFRDFTDYFFEVLTYPKEKWNLFWQDYKRTLDFINLYQEKKGIKDDEIVEKFKKIGRRELDRAFWYKQEIIKDLKAD
IIKDLTKSSEKFQVDRGDYAVYLTVFTGDSPYEFLESFIGTIIGIDILYFYFNRDKIDPKTLIEEAIMKFINSTPPNKKK
ADFWILYDKIKTLISDKNYNDKQSILKLISQLLAERIPYYNWVGFYLVDETEDNSLVLGPFVGEPTEHTKIKFGQGICGQ
AASTKTTFVVDDVSKEDNYLSCSPKTQSEIVVPIFDKNGNIVGEIDIDSHEKAPFDQDDRSFLEAIAKLLSERFW

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=127, Percent_Identity=38.5826771653543, Blast_Score=86, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322781, Length=113, Percent_Identity=46.9026548672566, Blast_Score=110, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 37030; Mature: 37030

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVFRDFTDYFFEVLTYPKEKWNLFWQDYKRTLDFINLYQEKKGIKDDEIVEKFKKIGR
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RELDRAFWYKQEIIKDLKADIIKDLTKSSEKFQVDRGDYAVYLTVFTGDSPYEFLESFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEEEEEEEECCCHHHHHHHHHH
TIIGIDILYFYFNRDKIDPKTLIEEAIMKFINSTPPNKKKADFWILYDKIKTLISDKNYN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCC
DKQSILKLISQLLAERIPYYNWVGFYLVDETEDNSLVLGPFVGEPTEHTKIKFGQGICGQ
HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEECCCCCCC
AASTKTTFVVDDVSKEDNYLSCSPKTQSEIVVPIFDKNGNIVGEIDIDSHEKAPFDQDDR
CCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHH
SFLEAIAKLLSERFW
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSVFRDFTDYFFEVLTYPKEKWNLFWQDYKRTLDFINLYQEKKGIKDDEIVEKFKKIGR
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RELDRAFWYKQEIIKDLKADIIKDLTKSSEKFQVDRGDYAVYLTVFTGDSPYEFLESFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCEEEEEEEEECCCHHHHHHHHHH
TIIGIDILYFYFNRDKIDPKTLIEEAIMKFINSTPPNKKKADFWILYDKIKTLISDKNYN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCC
DKQSILKLISQLLAERIPYYNWVGFYLVDETEDNSLVLGPFVGEPTEHTKIKFGQGICGQ
HHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEECCCCCCC
AASTKTTFVVDDVSKEDNYLSCSPKTQSEIVVPIFDKNGNIVGEIDIDSHEKAPFDQDDR
CCCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCHH
SFLEAIAKLLSERFW
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]