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The map label for this gene is nudL [H]

Identifier: 160902009

GI number: 160902009

Start: 585398

End: 586006

Strand: Direct

Name: nudL [H]

Synonym: Pmob_0533

Alternate gene names: 160902009

Gene position: 585398-586006 (Clockwise)

Preceding gene: 160902008

Following gene: 160902015

Centisome position: 26.98

GC content: 31.53

Gene sequence:

>609_bases
GTGAATATAGATAAAATTAAACAAATTTTTAAAGATTATTCTCCAAAACCTATAGGAGTAGAAAATTGTTTTTCAGTGTT
GATTTCTTTGATACAAAAAGACAACTCTTTACATCTTTTATACGAATTGAGATCAAAGACTTTAGAGAGACAACCTGGTG
AAGTTTCTTTTCCAGGAGGAGAAATTGAGGCAAATGAAACACCAAAAAATGCAGCAATTAGAGAAAGTTGTGAAGAATTG
AATTTGCAACCGAATAACATAGAAATATTGGGAGCAGCGGATTATCTCCTTACTCCCTTCAATTATTTAATATATTCGTA
TGTTGGCTTTTTGAATATAAACGTTAACACAATAAAACCTAATGAAGAAGTGGAAGAGGTATTTACGATACCGTTAGACT
ATTTCTTATCTCATGAACCTTTAGTGCATAACACTTATCTTACAAACGAAATAGATGAAGGATTCCCTTATGATCTTATA
CCTAACGGAAAAGATTACAACTGGAGAGTTGGCAAATATCCTGTTTATTTCTATGTTTACGAAGATAGAATTATTTGGGG
CATCACTGCCAGATTGACCTATGAATTTATTAAAAAATTGAGATGCTGA

Upstream 100 bases:

>100_bases
ATGAAAAAGCCCCTTTTGATCAAGACGATCGATCTTTTTTGGAGGCTATTGCCAAATTACTTTCTGAAAGATTTTGGTAA
ATAATAAATAAGGTGATTCT

Downstream 100 bases:

>100_bases
AGATTCAATCACACAGTATAAAAGTTAAATCATTTACATTTGTACCGGTAGGTCCCGTTATAACTAACCCGCCAATACTT
TGGAGAGCATTATATGAGTC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNIDKIKQIFKDYSPKPIGVENCFSVLISLIQKDNSLHLLYELRSKTLERQPGEVSFPGGEIEANETPKNAAIRESCEEL
NLQPNNIEILGAADYLLTPFNYLIYSYVGFLNINVNTIKPNEEVEEVFTIPLDYFLSHEPLVHNTYLTNEIDEGFPYDLI
PNGKDYNWRVGKYPVYFYVYEDRIIWGITARLTYEFIKKLRC

Sequences:

>Translated_202_residues
MNIDKIKQIFKDYSPKPIGVENCFSVLISLIQKDNSLHLLYELRSKTLERQPGEVSFPGGEIEANETPKNAAIRESCEEL
NLQPNNIEILGAADYLLTPFNYLIYSYVGFLNINVNTIKPNEEVEEVFTIPLDYFLSHEPLVHNTYLTNEIDEGFPYDLI
PNGKDYNWRVGKYPVYFYVYEDRIIWGITARLTYEFIKKLRC
>Mature_202_residues
MNIDKIKQIFKDYSPKPIGVENCFSVLISLIQKDNSLHLLYELRSKTLERQPGEVSFPGGEIEANETPKNAAIRESCEEL
NLQPNNIEILGAADYLLTPFNYLIYSYVGFLNINVNTIKPNEEVEEVFTIPLDYFLSHEPLVHNTYLTNEIDEGFPYDLI
PNGKDYNWRVGKYPVYFYVYEDRIIWGITARLTYEFIKKLRC

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=135, Percent_Identity=37.037037037037, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17536993, Length=185, Percent_Identity=28.6486486486486, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23547; Mature: 23547

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDKIKQIFKDYSPKPIGVENCFSVLISLIQKDNSLHLLYELRSKTLERQPGEVSFPGG
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEECCCC
EIEANETPKNAAIRESCEELNLQPNNIEILGAADYLLTPFNYLIYSYVGFLNINVNTIKP
CEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEEEECC
NEEVEEVFTIPLDYFLSHEPLVHNTYLTNEIDEGFPYDLIPNGKDYNWRVGKYPVYFYVY
CHHHHHHHHCCHHHHHCCCCEEECCEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEE
EDRIIWGITARLTYEFIKKLRC
ECEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIDKIKQIFKDYSPKPIGVENCFSVLISLIQKDNSLHLLYELRSKTLERQPGEVSFPGG
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEECCCC
EIEANETPKNAAIRESCEELNLQPNNIEILGAADYLLTPFNYLIYSYVGFLNINVNTIKP
CEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEEEECC
NEEVEEVFTIPLDYFLSHEPLVHNTYLTNEIDEGFPYDLIPNGKDYNWRVGKYPVYFYVY
CHHHHHHHHCCHHHHHCCCCEEECCEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEE
EDRIIWGITARLTYEFIKKLRC
ECEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]