| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876805
Identifier: 160876805
GI number: 160876805
Start: 4366029
End: 4367201
Strand: Direct
Name: 160876805
Synonym: Sbal195_3701
Alternate gene names: NA
Gene position: 4366029-4367201 (Clockwise)
Preceding gene: 160876804
Following gene: 160876807
Centisome position: 81.65
GC content: 51.92
Gene sequence:
>1173_bases ATGCTGACCACACTCGCCATTTTCAATTATCGCTCTCTGCGTGAAATCGTCTTGCCCCTAGGGCAACTGAATTTGATCAC AGGGGCAAATGGCAGTGGTAAATCGAACCTATACAAGGCGCTACGTTTACTGGCACAAACGGCGCAAGGCGGCGTCGTCA ACGCATTAGCCCAAGAAGGCGGACTCGACTCCAGCTTTTGGGCGGGGCCAGAAAACTTCACCAAAAGCATGTTAGCGGGC GACACAGCCATTGAAGCCACCGTCAGGCAAGCGCCAAAACGCTTAAAGCTCGGCTTTGGCGGCGAGGACTTTAGCTATCT TATTGAACTCGGTTTACCTGAACCCGACGCTACTACGCTGTTTGGCTTAGATCCACAAATCAAGCGCGAAGCCATTTGGA ACGGACCTAAGTATCGCACCTCTACAGTGTTAGTCGAGCGCCGTGGTCCTATGGTGAAAAGCCGCAGTGCTGATGGAAAA GGCTGGATAATCTTAGGCGCCCACCTGCAAACTGGCGACAGTATTTTTACCGAGCTTGCCGATCCCGAGCGCTGCCCAGA AGTGCTCAAGCTTCGCGACAGTATCCGCGCGTGGCGCTTTTACGATCACTTCAGAACCGATGCAGAAGCCCCTGCACGGC GACCACAATTAGGCACGGCCACGCCGGTATTGCACCACGATGGCCGTGATTTAGCCTCGGCAATTCAAACCATTTTTGAG ATAGGCGATAAATCGGCTTTCGATCATGCGGTGAGCGATGCATTTCCCGGTGCTAAGGTTCGAATCGAGTCTCAAGCGGG CGGCATTTTAGTGCTCGCATTTCATCAGCATGGTTTATTAAGGCCACTCAATGCCAGTGAATTGTCGGACGGCACCTTGC GTTATTTGCTGTTAATCGCCGCCCTACTGACCCCAAGACCGCCAGAACTTATGGTGTTAAACGAGCCAGAAACCAGTCTG CATCCAGATTTATTGCCTGCGCTGGCACGCTTAATTGCTAAGGTATCAGAGGAGTGTCAACTATGGGTGGTATCCCACGC CAATCGGCTTATCAATGCCTTAAGCCAATTTGAACACTGCAATACCTTGGCCTTAGACAAAACCTTAGGCCAAACGCAGA TCCAAGGCCAAGACTTGCTCAATACGCCCAGTTGGCTATGGCAGAATCGTTAG
Upstream 100 bases:
>100_bases ATAAAGTACTACTGTAAATAGCATTGTTTTATCGCCCTATTTAATTTACGTTGTCGAAAAATTTACGGGCTTATCTGCTC GTTTCAGTCTTGGATATTCT
Downstream 100 bases:
>100_bases TCGGCGGTGTTAACGCGACTGCCCTCATCAATCGTAAAATACCGCGAGCCATAGGGTTTCTGAACTGTTAGAAGTCGAAG CGACGCGGTGTTTTTGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; ATPase RecF-Like Protein; RecF/RecN/SMC N Terminal Domain; Recf Like Family Protein; SMC Domain Protein; DNA Replication And Repair Protein RecF; RecF/RecN/SMC Domain-Containing Protein; ATPase RecF-Like
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MLTTLAIFNYRSLREIVLPLGQLNLITGANGSGKSNLYKALRLLAQTAQGGVVNALAQEGGLDSSFWAGPENFTKSMLAG DTAIEATVRQAPKRLKLGFGGEDFSYLIELGLPEPDATTLFGLDPQIKREAIWNGPKYRTSTVLVERRGPMVKSRSADGK GWIILGAHLQTGDSIFTELADPERCPEVLKLRDSIRAWRFYDHFRTDAEAPARRPQLGTATPVLHHDGRDLASAIQTIFE IGDKSAFDHAVSDAFPGAKVRIESQAGGILVLAFHQHGLLRPLNASELSDGTLRYLLLIAALLTPRPPELMVLNEPETSL HPDLLPALARLIAKVSEECQLWVVSHANRLINALSQFEHCNTLALDKTLGQTQIQGQDLLNTPSWLWQNR
Sequences:
>Translated_390_residues MLTTLAIFNYRSLREIVLPLGQLNLITGANGSGKSNLYKALRLLAQTAQGGVVNALAQEGGLDSSFWAGPENFTKSMLAG DTAIEATVRQAPKRLKLGFGGEDFSYLIELGLPEPDATTLFGLDPQIKREAIWNGPKYRTSTVLVERRGPMVKSRSADGK GWIILGAHLQTGDSIFTELADPERCPEVLKLRDSIRAWRFYDHFRTDAEAPARRPQLGTATPVLHHDGRDLASAIQTIFE IGDKSAFDHAVSDAFPGAKVRIESQAGGILVLAFHQHGLLRPLNASELSDGTLRYLLLIAALLTPRPPELMVLNEPETSL HPDLLPALARLIAKVSEECQLWVVSHANRLINALSQFEHCNTLALDKTLGQTQIQGQDLLNTPSWLWQNR >Mature_390_residues MLTTLAIFNYRSLREIVLPLGQLNLITGANGSGKSNLYKALRLLAQTAQGGVVNALAQEGGLDSSFWAGPENFTKSMLAG DTAIEATVRQAPKRLKLGFGGEDFSYLIELGLPEPDATTLFGLDPQIKREAIWNGPKYRTSTVLVERRGPMVKSRSADGK GWIILGAHLQTGDSIFTELADPERCPEVLKLRDSIRAWRFYDHFRTDAEAPARRPQLGTATPVLHHDGRDLASAIQTIFE IGDKSAFDHAVSDAFPGAKVRIESQAGGILVLAFHQHGLLRPLNASELSDGTLRYLLLIAALLTPRPPELMVLNEPETSL HPDLLPALARLIAKVSEECQLWVVSHANRLINALSQFEHCNTLALDKTLGQTQIQGQDLLNTPSWLWQNR
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42832; Mature: 42832
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTLAIFNYRSLREIVLPLGQLNLITGANGSGKSNLYKALRLLAQTAQGGVVNALAQEG CCEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCC GLDSSFWAGPENFTKSMLAGDTAIEATVRQAPKRLKLGFGGEDFSYLIELGLPEPDATTL CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHEECCCCCCCCEEEEEECCCCCCCCEE FGLDPQIKREAIWNGPKYRTSTVLVERRGPMVKSRSADGKGWIILGAHLQTGDSIFTELA ECCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECEECCCHHHHHHHC DPERCPEVLKLRDSIRAWRFYDHFRTDAEAPARRPQLGTATPVLHHDGRDLASAIQTIFE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH IGDKSAFDHAVSDAFPGAKVRIESQAGGILVLAFHQHGLLRPLNASELSDGTLRYLLLIA HCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH ALLTPRPPELMVLNEPETSLHPDLLPALARLIAKVSEECQLWVVSHANRLINALSQFEHC HHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHC NTLALDKTLGQTQIQGQDLLNTPSWLWQNR CCCHHHHHCCCCCCCCCHHCCCCHHHHCCC >Mature Secondary Structure MLTTLAIFNYRSLREIVLPLGQLNLITGANGSGKSNLYKALRLLAQTAQGGVVNALAQEG CCEEEEEHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCC GLDSSFWAGPENFTKSMLAGDTAIEATVRQAPKRLKLGFGGEDFSYLIELGLPEPDATTL CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHEECCCCCCCCEEEEEECCCCCCCCEE FGLDPQIKREAIWNGPKYRTSTVLVERRGPMVKSRSADGKGWIILGAHLQTGDSIFTELA ECCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECEECCCHHHHHHHC DPERCPEVLKLRDSIRAWRFYDHFRTDAEAPARRPQLGTATPVLHHDGRDLASAIQTIFE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH IGDKSAFDHAVSDAFPGAKVRIESQAGGILVLAFHQHGLLRPLNASELSDGTLRYLLLIA HCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH ALLTPRPPELMVLNEPETSLHPDLLPALARLIAKVSEECQLWVVSHANRLINALSQFEHC HHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHC NTLALDKTLGQTQIQGQDLLNTPSWLWQNR CCCHHHHHCCCCCCCCCHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA