| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876804
Identifier: 160876804
GI number: 160876804
Start: 4364779
End: 4365945
Strand: Direct
Name: 160876804
Synonym: Sbal195_3700
Alternate gene names: NA
Gene position: 4364779-4365945 (Clockwise)
Preceding gene: 160876803
Following gene: 160876805
Centisome position: 81.63
GC content: 51.33
Gene sequence:
>1167_bases ATGCCCATCAAGGCAGTCAATCACCACCGTCGTACTCTTCTTAAAGGTCTTGGCGCAGCAACACTATTAAGCCCACTCGC CAGTATGCCAAGCTTTGCCGCCAAACCAAGGCGGATATATGTCGATGGTTTATCCTTCCTTCCCGATGACTTAAGTGATG TAACCGCCTCTAAACTCGATGCCTATCTTTGCGATATTTCGGCGATTGAGACCATAGAACAAGCCGATGGCACTCAAAAC TACAAACGCACTTATAAAGCCTGCATGGAAAGCATTAAGCAGGCCGCTAAACGAGTGAGCGATCATCCAGATATTTTACT GCAAGGCCTGAGGGGACGAGATATTCAACGTGCCCGCGACAGCCAGCGCACTGCGGTATTCTTTCAAATCCAAGGCGCAG ATTGTGTCGAAGAAGACAGTGAAGCTAATCAGTGGGCACGGGTGGATGAATTCCATCAACAAGGGCTGCGCGTATTACAG CTCACCCACCACTATGGCAACACTTTCGCTGGCGGCGCCTTAGACAGTGATACCAATGGCGGACTCAACAAGCCACTCAC CGCCCATGGACGCGAACTTATCGCCAAACTCAATCATGCCAATATCTTGGTCGATGTGAGTCACTCCAGCGCCCAAACCG CTTTAGATGTCGCTAAGATCACGAAGTCTCCCATAGTGCAGAGTCACGGTGCAGCGCGCGGCATAGTTAACCATGCCCGT TGTTCCCCCGATGAAGTGATCCGCGCCATCGGCGATAGCGGCGGCGTATTCGGCGTATTTATGATGAGCTTCTGGCTCAC CAATAATGCCGTGCCCACGATCGATGACTATATTCGCCAGCTGGAATACGTGTCGCGTGTCGGCGGTGTAGATAGTGTGG CAATCGCCAACGACTTCCCACTGCGTGGCCAAGAAAACTTACTCGCTCTTGATAACAATAACGCCAAAGGCATTAAAGAA TATCAAGAATGGTGGTACAGCCTGAGAGCAAAAGGCGTGCTAGGTTTCGATGCAGAGCCAAGGCATGTCGTGATCCCCGA GCTAAATCATATCGATCGCATGAGCCGTATCGATGATGCCTTAGCCAAGGCGCGCTTTAAAGCCACCGACCGCGACCGCT TTATGGGTGGCAACTGGCAACGCGTGCTCAATAAAGTACTACTGTAA
Upstream 100 bases:
>100_bases CAACTCGGGGACAAAGGCCAAAAAAGGGATTTAATCAAAGACTTCTACGCCCTAAAAAGGTATAAAGAAGTTACATTTGA GTTATTGATAGGAACCGAGC
Downstream 100 bases:
>100_bases ATAGCATTGTTTTATCGCCCTATTTAATTTACGTTGTCGAAAAATTTACGGGCTTATCTGCTCGTTTCAGTCTTGGATAT TCTATGCTGACCACACTCGC
Product: peptidase M19 renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MPIKAVNHHRRTLLKGLGAATLLSPLASMPSFAAKPRRIYVDGLSFLPDDLSDVTASKLDAYLCDISAIETIEQADGTQN YKRTYKACMESIKQAAKRVSDHPDILLQGLRGRDIQRARDSQRTAVFFQIQGADCVEEDSEANQWARVDEFHQQGLRVLQ LTHHYGNTFAGGALDSDTNGGLNKPLTAHGRELIAKLNHANILVDVSHSSAQTALDVAKITKSPIVQSHGAARGIVNHAR CSPDEVIRAIGDSGGVFGVFMMSFWLTNNAVPTIDDYIRQLEYVSRVGGVDSVAIANDFPLRGQENLLALDNNNAKGIKE YQEWWYSLRAKGVLGFDAEPRHVVIPELNHIDRMSRIDDALAKARFKATDRDRFMGGNWQRVLNKVLL
Sequences:
>Translated_388_residues MPIKAVNHHRRTLLKGLGAATLLSPLASMPSFAAKPRRIYVDGLSFLPDDLSDVTASKLDAYLCDISAIETIEQADGTQN YKRTYKACMESIKQAAKRVSDHPDILLQGLRGRDIQRARDSQRTAVFFQIQGADCVEEDSEANQWARVDEFHQQGLRVLQ LTHHYGNTFAGGALDSDTNGGLNKPLTAHGRELIAKLNHANILVDVSHSSAQTALDVAKITKSPIVQSHGAARGIVNHAR CSPDEVIRAIGDSGGVFGVFMMSFWLTNNAVPTIDDYIRQLEYVSRVGGVDSVAIANDFPLRGQENLLALDNNNAKGIKE YQEWWYSLRAKGVLGFDAEPRHVVIPELNHIDRMSRIDDALAKARFKATDRDRFMGGNWQRVLNKVLL >Mature_387_residues PIKAVNHHRRTLLKGLGAATLLSPLASMPSFAAKPRRIYVDGLSFLPDDLSDVTASKLDAYLCDISAIETIEQADGTQNY KRTYKACMESIKQAAKRVSDHPDILLQGLRGRDIQRARDSQRTAVFFQIQGADCVEEDSEANQWARVDEFHQQGLRVLQL THHYGNTFAGGALDSDTNGGLNKPLTAHGRELIAKLNHANILVDVSHSSAQTALDVAKITKSPIVQSHGAARGIVNHARC SPDEVIRAIGDSGGVFGVFMMSFWLTNNAVPTIDDYIRQLEYVSRVGGVDSVAIANDFPLRGQENLLALDNNNAKGIKEY QEWWYSLRAKGVLGFDAEPRHVVIPELNHIDRMSRIDDALAKARFKATDRDRFMGGNWQRVLNKVLL
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=181, Percent_Identity=25.414364640884, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI189458885, Length=223, Percent_Identity=20.627802690583, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI4758190, Length=223, Percent_Identity=20.627802690583, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI161083233, Length=152, Percent_Identity=30.2631578947368, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI281362638, Length=213, Percent_Identity=23.943661971831, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI281362636, Length=213, Percent_Identity=23.943661971831, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI221475880, Length=205, Percent_Identity=24.390243902439, Blast_Score=72, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 42953; Mature: 42822
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKAVNHHRRTLLKGLGAATLLSPLASMPSFAAKPRRIYVDGLSFLPDDLSDVTASKLD CCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCEEEECCCCCCCCCHHHHHHHHHH AYLCDISAIETIEQADGTQNYKRTYKACMESIKQAAKRVSDHPDILLQGLRGRDIQRARD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHC SQRTAVFFQIQGADCVEEDSEANQWARVDEFHQQGLRVLQLTHHYGNTFAGGALDSDTNG CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC GLNKPLTAHGRELIAKLNHANILVDVSHSSAQTALDVAKITKSPIVQSHGAARGIVNHAR CCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHC CSPDEVIRAIGDSGGVFGVFMMSFWLTNNAVPTIDDYIRQLEYVSRVGGVDSVAIANDFP CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCC LRGQENLLALDNNNAKGIKEYQEWWYSLRAKGVLGFDAEPRHVVIPELNHIDRMSRIDDA CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCHHHHHHHHHHHH LAKARFKATDRDRFMGGNWQRVLNKVLL HHHHHHCCCCCHHCCCCCHHHHHHHHCC >Mature Secondary Structure PIKAVNHHRRTLLKGLGAATLLSPLASMPSFAAKPRRIYVDGLSFLPDDLSDVTASKLD CCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCEEEECCCCCCCCCHHHHHHHHHH AYLCDISAIETIEQADGTQNYKRTYKACMESIKQAAKRVSDHPDILLQGLRGRDIQRARD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHC SQRTAVFFQIQGADCVEEDSEANQWARVDEFHQQGLRVLQLTHHYGNTFAGGALDSDTNG CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC GLNKPLTAHGRELIAKLNHANILVDVSHSSAQTALDVAKITKSPIVQSHGAARGIVNHAR CCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHHC CSPDEVIRAIGDSGGVFGVFMMSFWLTNNAVPTIDDYIRQLEYVSRVGGVDSVAIANDFP CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCC LRGQENLLALDNNNAKGIKEYQEWWYSLRAKGVLGFDAEPRHVVIPELNHIDRMSRIDDA CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCHHHHHHHHHHHH LAKARFKATDRDRFMGGNWQRVLNKVLL HHHHHHCCCCCHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]