| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876807
Identifier: 160876807
GI number: 160876807
Start: 4367727
End: 4370243
Strand: Direct
Name: 160876807
Synonym: Sbal195_3703
Alternate gene names: NA
Gene position: 4367727-4370243 (Clockwise)
Preceding gene: 160876805
Following gene: 160876810
Centisome position: 81.68
GC content: 46.13
Gene sequence:
>2517_bases ATGTCGTTGTTTCGCGCACTAAAAGCCAAATTATTTCCCTCAAGCCAAACTAGCCGCGATCCAAAAGACATTCATCTTCA AACTGAACCACAAGCACCCAGCCAAGAACAAGAGCAAACGCAGGAGCCGTCAGTCGCGGTGCCGCTATTCCGGCGTCACT TCAGCTTAAAAATCCATACAACAAAGGCAGACGCGACCGCTTGTGAAGAAAATGCCGACCACGGCTTAACTCTCTATCAC TACGATACGCCCCAAGTCATAGAACTCTTAGGCTGGGAAAATGCCAATGAATGCTGTGACTTTCACCAAACCGAATTCGA CCGCCTCGAAATCGGCAATCAATCCCCTTTTCCCGAGCAACACTTTTGGCTCGGCAAAGACAAAGTCTGCAGTATCATCC CAAAAACGAACGACCAAACAACAGCATTGTGGCAGGTTGAACTTAACAATCTAGAGGCTTTATTGATAAGCCACTTTACG CTCGATGCAGACAATATAGTACAAGGTGACATTCAAGATTACGCCAGTTTAACAGGCCAACTGCATCGCACTTACCATCA ACTCCATTCTGAAGACGGCGCGGGTATGCTGAGAATTATCACCCAAAGCCCAGGACTCACCCAAGCCGTCGATTCAAATT ACTTTGGCGAGCGTAATGGGATTTCGCGCCAATTCGACGCCCTAGGGACACTGCTTTTTGAAGGCCACTTTGTTAATGAC CTACAACTCGGCAAACAAACATGGTACGACCATGAGGGCAAGAAAACGCAAAGTGAAGATCGCCACGCGAATGGCATGTA TGTCACCCGTTATCATACGAATGGTAAAATAAGAGAAACCGCCGAACTCGACCGCAGTGGCAACTATATCAATAACTTGG CGCGTTTCTACGAATCGGGAAATTTATGGCTTAACCGCCCTATGGTGGCGAATAAAATCCACGGCATTGAGTATATGTAC TACGAATGTGGCGCCCTACAAGCCGAAATTACTCATGAGCATGGCAATATAGTGCAAGAGTTTTGGTTTCACACCAATGG CTTGATCAAGCAAACCATCTTCATTAATGACATGGGTAAAAGTGTCGAAACCTTCTACGAAACCGATCATATCGCATGGC GAGAGCAGTTCAATGCTGAAGGTTTGATTGAAGGGGAGCGTAAAGAGTGGCATCCAAATGGCAAGCTCGCCAAACAACTC AACTTCACTAACGGTATCGCCCACGGCGATCGAGAAAAATGGTATCCCAATGGTCAGCTCGAAGAGAAAATCCCCTTCGA GAATGGCAAAGAACAAGGCACAGCCTATTGGTACCATGACAATGGCCAACTCGCCCTTGAGATCTACCTTGAAAAGGGAC TCAGAGAAGGTCTGTTTAAAAGCTATTACCAAAGCGGCGTGCTTTCGGGCGAAGGCCAATACCAAAATAATCTCTCGGTA GCGCCCTTTATCGAATACTACGAAAACCAGCAAATTCAAATGTATTTACCGCACACCCAAGGCAACCGTGACGGTACTGC CCGCTGGTTTTACCAAGATGGCACCATTCGCACTATCTCTGAGTATGAAGTGCGCGACGGCCAAGGCTACCTCAGAGAAT CCAGCTTTTATAACAAAAAGGGGATCCTCGAATCCTATCAGAGCCACTCGAATACCCGCTGCGGCTATCATCTTGAGAAT AATCAAAGGGAATACTATCAAGACGGTATTGCCGACACTCGCATAGAATACTATGAAGATGGCGCCATTCGCTGGTTACT CACCCGTACGCAAGGGGATTTATTTAGCTCTAAATCCTTATCACCTCAAGGTTTAATTTTAGAAACTGGCACAATCCAAA TTATCGATGGCCGTTACCTCGATATCGGCCATTGGCAGCGTTTTACGCCCCAAGGACAAGTGTATCGTGAAGTTTGGCTA GATGAAGAAGGCCAACTTATAGAAAGTCGTCACTACTTTGATGTTAATCAGCCTCTATCGACTCAAGAAGATGACGAAGC AGAATGGGATAACGCAGAGCCCCGTAATTATGGCTATGATAATTGCGACATCAGTGACTATGATGAAAGCGAAGACGAGA GCGATGACTTTGATTATGATCGTGCTGATTGGGAAAATGACGGGCTAAACCAGCGTTCAGATAACCGTGAACATAGCGCT AGCCATAGTAGCAATAGCGCATATTTGTCCCGCAACAAGTATCACAGACTCAATGGCGATACCACAGCGAAACAAGCACA AACACAAGCCGCAGCGGATGTCGACGCCAAAGAGCCGATATTGTCTTACCACTTAAAATTTGACGACGAAAGTAAGCTTT ATTCAATGAAGCGCTATCATCCCAATAGCCACATTGCCGAAGAAGGTAATTTACAGATCCAAGGAGAAGAACAATTCTGG GTCGGTATTCACAATCAATACGATGAGCAAGGTAAGCTCAAACTCTCCGAAACCTACACTATGGCAGGAGAGCCGATAGA GCACACCACCAGCACGAATGCGATATTGTTAAATTAA
Upstream 100 bases:
>100_bases ACCATTAACCGCTATGATATGCGCACTGAAATACTCAAGGGCCATGAGTATCCATCAGATAAGCTTATTGTTTTACATAT GGATATGGAGATCTCCCCCA
Downstream 100 bases:
>100_bases TCAAGTTGATATGGATAATGTTAGTACCAATAGGTATGAAGGGTGAGTATAGATAATGCGGTAAGCCCTGATTTAACTTG GCTTACCTTATTTGTCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 838; Mature: 837
Protein sequence:
>838_residues MSLFRALKAKLFPSSQTSRDPKDIHLQTEPQAPSQEQEQTQEPSVAVPLFRRHFSLKIHTTKADATACEENADHGLTLYH YDTPQVIELLGWENANECCDFHQTEFDRLEIGNQSPFPEQHFWLGKDKVCSIIPKTNDQTTALWQVELNNLEALLISHFT LDADNIVQGDIQDYASLTGQLHRTYHQLHSEDGAGMLRIITQSPGLTQAVDSNYFGERNGISRQFDALGTLLFEGHFVND LQLGKQTWYDHEGKKTQSEDRHANGMYVTRYHTNGKIRETAELDRSGNYINNLARFYESGNLWLNRPMVANKIHGIEYMY YECGALQAEITHEHGNIVQEFWFHTNGLIKQTIFINDMGKSVETFYETDHIAWREQFNAEGLIEGERKEWHPNGKLAKQL NFTNGIAHGDREKWYPNGQLEEKIPFENGKEQGTAYWYHDNGQLALEIYLEKGLREGLFKSYYQSGVLSGEGQYQNNLSV APFIEYYENQQIQMYLPHTQGNRDGTARWFYQDGTIRTISEYEVRDGQGYLRESSFYNKKGILESYQSHSNTRCGYHLEN NQREYYQDGIADTRIEYYEDGAIRWLLTRTQGDLFSSKSLSPQGLILETGTIQIIDGRYLDIGHWQRFTPQGQVYREVWL DEEGQLIESRHYFDVNQPLSTQEDDEAEWDNAEPRNYGYDNCDISDYDESEDESDDFDYDRADWENDGLNQRSDNREHSA SHSSNSAYLSRNKYHRLNGDTTAKQAQTQAAADVDAKEPILSYHLKFDDESKLYSMKRYHPNSHIAEEGNLQIQGEEQFW VGIHNQYDEQGKLKLSETYTMAGEPIEHTTSTNAILLN
Sequences:
>Translated_838_residues MSLFRALKAKLFPSSQTSRDPKDIHLQTEPQAPSQEQEQTQEPSVAVPLFRRHFSLKIHTTKADATACEENADHGLTLYH YDTPQVIELLGWENANECCDFHQTEFDRLEIGNQSPFPEQHFWLGKDKVCSIIPKTNDQTTALWQVELNNLEALLISHFT LDADNIVQGDIQDYASLTGQLHRTYHQLHSEDGAGMLRIITQSPGLTQAVDSNYFGERNGISRQFDALGTLLFEGHFVND LQLGKQTWYDHEGKKTQSEDRHANGMYVTRYHTNGKIRETAELDRSGNYINNLARFYESGNLWLNRPMVANKIHGIEYMY YECGALQAEITHEHGNIVQEFWFHTNGLIKQTIFINDMGKSVETFYETDHIAWREQFNAEGLIEGERKEWHPNGKLAKQL NFTNGIAHGDREKWYPNGQLEEKIPFENGKEQGTAYWYHDNGQLALEIYLEKGLREGLFKSYYQSGVLSGEGQYQNNLSV APFIEYYENQQIQMYLPHTQGNRDGTARWFYQDGTIRTISEYEVRDGQGYLRESSFYNKKGILESYQSHSNTRCGYHLEN NQREYYQDGIADTRIEYYEDGAIRWLLTRTQGDLFSSKSLSPQGLILETGTIQIIDGRYLDIGHWQRFTPQGQVYREVWL DEEGQLIESRHYFDVNQPLSTQEDDEAEWDNAEPRNYGYDNCDISDYDESEDESDDFDYDRADWENDGLNQRSDNREHSA SHSSNSAYLSRNKYHRLNGDTTAKQAQTQAAADVDAKEPILSYHLKFDDESKLYSMKRYHPNSHIAEEGNLQIQGEEQFW VGIHNQYDEQGKLKLSETYTMAGEPIEHTTSTNAILLN >Mature_837_residues SLFRALKAKLFPSSQTSRDPKDIHLQTEPQAPSQEQEQTQEPSVAVPLFRRHFSLKIHTTKADATACEENADHGLTLYHY DTPQVIELLGWENANECCDFHQTEFDRLEIGNQSPFPEQHFWLGKDKVCSIIPKTNDQTTALWQVELNNLEALLISHFTL DADNIVQGDIQDYASLTGQLHRTYHQLHSEDGAGMLRIITQSPGLTQAVDSNYFGERNGISRQFDALGTLLFEGHFVNDL QLGKQTWYDHEGKKTQSEDRHANGMYVTRYHTNGKIRETAELDRSGNYINNLARFYESGNLWLNRPMVANKIHGIEYMYY ECGALQAEITHEHGNIVQEFWFHTNGLIKQTIFINDMGKSVETFYETDHIAWREQFNAEGLIEGERKEWHPNGKLAKQLN FTNGIAHGDREKWYPNGQLEEKIPFENGKEQGTAYWYHDNGQLALEIYLEKGLREGLFKSYYQSGVLSGEGQYQNNLSVA PFIEYYENQQIQMYLPHTQGNRDGTARWFYQDGTIRTISEYEVRDGQGYLRESSFYNKKGILESYQSHSNTRCGYHLENN QREYYQDGIADTRIEYYEDGAIRWLLTRTQGDLFSSKSLSPQGLILETGTIQIIDGRYLDIGHWQRFTPQGQVYREVWLD EEGQLIESRHYFDVNQPLSTQEDDEAEWDNAEPRNYGYDNCDISDYDESEDESDDFDYDRADWENDGLNQRSDNREHSAS HSSNSAYLSRNKYHRLNGDTTAKQAQTQAAADVDAKEPILSYHLKFDDESKLYSMKRYHPNSHIAEEGNLQIQGEEQFWV GIHNQYDEQGKLKLSETYTMAGEPIEHTTSTNAILLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97017; Mature: 96886
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFRALKAKLFPSSQTSRDPKDIHLQTEPQAPSQEQEQTQEPSVAVPLFRRHFSLKIHT CHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCEEEHHHHCEEEEEEEE TKADATACEENADHGLTLYHYDTPQVIELLGWENANECCDFHQTEFDRLEIGNQSPFPEQ CCCCCHHHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHCCCCCCHHEECCCCCCCCCH HFWLGKDKVCSIIPKTNDQTTALWQVELNNLEALLISHFTLDADNIVQGDIQDYASLTGQ HEECCCCCEEEECCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH LHRTYHQLHSEDGAGMLRIITQSPGLTQAVDSNYFGERNGISRQFDALGTLLFEGHFVND HHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEECH LQLGKQTWYDHEGKKTQSEDRHANGMYVTRYHTNGKIRETAELDRSGNYINNLARFYESG HHHCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHCCCCCHHHHHHHHHHCC NLWLNRPMVANKIHGIEYMYYECGALQAEITHEHGNIVQEFWFHTNGLIKQTIFINDMGK CEEECCCHHHHHHCCEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCC SVETFYETDHIAWREQFNAEGLIEGERKEWHPNGKLAKQLNFTNGIAHGDREKWYPNGQL HHHHHHHCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC EEKIPFENGKEQGTAYWYHDNGQLALEIYLEKGLREGLFKSYYQSGVLSGEGQYQNNLSV CCCCCCCCCCCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC APFIEYYENQQIQMYLPHTQGNRDGTARWFYQDGTIRTISEYEVRDGQGYLRESSFYNKK CHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCEECCCCCCHH GILESYQSHSNTRCGYHLENNQREYYQDGIADTRIEYYEDGAIRWLLTRTQGDLFSSKSL HHHHHHHHCCCCCCCEEECCCCHHHHHCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCC SPQGLILETGTIQIIDGRYLDIGHWQRFTPQGQVYREVWLDEEGQLIESRHYFDVNQPLS CCCCEEEECCEEEEECCEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCCEECCCCCCC TQEDDEAEWDNAEPRNYGYDNCDISDYDESEDESDDFDYDRADWENDGLNQRSDNREHSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC SHSSNSAYLSRNKYHRLNGDTTAKQAQTQAAADVDAKEPILSYHLKFDDESKLYSMKRYH CCCCCCEEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHCC PNSHIAEEGNLQIQGEEQFWVGIHNQYDEQGKLKLSETYTMAGEPIEHTTSTNAILLN CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEC >Mature Secondary Structure SLFRALKAKLFPSSQTSRDPKDIHLQTEPQAPSQEQEQTQEPSVAVPLFRRHFSLKIHT HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCEEEHHHHCEEEEEEEE TKADATACEENADHGLTLYHYDTPQVIELLGWENANECCDFHQTEFDRLEIGNQSPFPEQ CCCCCHHHHCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHCCCCCCHHEECCCCCCCCCH HFWLGKDKVCSIIPKTNDQTTALWQVELNNLEALLISHFTLDADNIVQGDIQDYASLTGQ HEECCCCCEEEECCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH LHRTYHQLHSEDGAGMLRIITQSPGLTQAVDSNYFGERNGISRQFDALGTLLFEGHFVND HHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEECH LQLGKQTWYDHEGKKTQSEDRHANGMYVTRYHTNGKIRETAELDRSGNYINNLARFYESG HHHCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHCCCCCHHHHHHHHHHCC NLWLNRPMVANKIHGIEYMYYECGALQAEITHEHGNIVQEFWFHTNGLIKQTIFINDMGK CEEECCCHHHHHHCCEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCC SVETFYETDHIAWREQFNAEGLIEGERKEWHPNGKLAKQLNFTNGIAHGDREKWYPNGQL HHHHHHHCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC EEKIPFENGKEQGTAYWYHDNGQLALEIYLEKGLREGLFKSYYQSGVLSGEGQYQNNLSV CCCCCCCCCCCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC APFIEYYENQQIQMYLPHTQGNRDGTARWFYQDGTIRTISEYEVRDGQGYLRESSFYNKK CHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCEECCCCCCHH GILESYQSHSNTRCGYHLENNQREYYQDGIADTRIEYYEDGAIRWLLTRTQGDLFSSKSL HHHHHHHHCCCCCCCEEECCCCHHHHHCCCCCCEEEEEECCEEEEEEEECCCCCCCCCCC SPQGLILETGTIQIIDGRYLDIGHWQRFTPQGQVYREVWLDEEGQLIESRHYFDVNQPLS CCCCEEEECCEEEEECCEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCCEECCCCCCC TQEDDEAEWDNAEPRNYGYDNCDISDYDESEDESDDFDYDRADWENDGLNQRSDNREHSA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC SHSSNSAYLSRNKYHRLNGDTTAKQAQTQAAADVDAKEPILSYHLKFDDESKLYSMKRYH CCCCCCEEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHCC PNSHIAEEGNLQIQGEEQFWVGIHNQYDEQGKLKLSETYTMAGEPIEHTTSTNAILLN CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA