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The map label for this gene is ygdK [H]

Identifier: 160876803

GI number: 160876803

Start: 4364134

End: 4364580

Strand: Direct

Name: ygdK [H]

Synonym: Sbal195_3699

Alternate gene names: 160876803

Gene position: 4364134-4364580 (Clockwise)

Preceding gene: 160876802

Following gene: 160876804

Centisome position: 81.61

GC content: 48.32

Gene sequence:

>447_bases
ATGACAGATTCGACTATGCCTATGCCAAGCGAGGCCGATTTTCACTATTCAGTGCAAGATGCCGAGACCTTGCTAGCGCG
TTTTACCAAGGCACCTAACTGGCAGGAAAGATATCGCCAAATTATGTTGCTAGGGAAAGACTTACCGAGTTTAAGCCCAG
AACTTCGCGTCGAAGCCGCTCAAGTAAAAGGCTGTGAAAGTGATGCGTGGATTTATCATCTCGAACAGGCTGGGAAGCAC
TATTATTTAGCCGACAGCGATGCCCGCATTGTTAAGGGATTGATCGGATTATTGCTTGGCGCCTGCCATGGCAAAAGTCG
CGCTGAGATCCAAGCATTTGATCCTACAGCTTACTTCAAACAATTGGGGTTAGAAGGTCAGCTCAGCCCATCACGCACCA
ACGGCCTTAATTCACTCGCAAAAGCCATGCTTGAAGCCACTCTATAG

Upstream 100 bases:

>100_bases
TGATCCAGTATTTAACGACTGAACCACGCGACTCATGTGCTCAAGATCAGTTACGCTCAAGACAAGTTATGCTCAAATAA
GTGAGACAGGATTTAGCCCT

Downstream 100 bases:

>100_bases
CTTCACGATATCTTCACGATAGCCACAGGCCAAGGGTTTTCATTTACTGCGACCAGCGATAATTGAAACCGCTTGGCAAT
AACGAATCATCACAACTCCA

Product: Fe-S metabolism associated SufE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTDSTMPMPSEADFHYSVQDAETLLARFTKAPNWQERYRQIMLLGKDLPSLSPELRVEAAQVKGCESDAWIYHLEQAGKH
YYLADSDARIVKGLIGLLLGACHGKSRAEIQAFDPTAYFKQLGLEGQLSPSRTNGLNSLAKAMLEATL

Sequences:

>Translated_148_residues
MTDSTMPMPSEADFHYSVQDAETLLARFTKAPNWQERYRQIMLLGKDLPSLSPELRVEAAQVKGCESDAWIYHLEQAGKH
YYLADSDARIVKGLIGLLLGACHGKSRAEIQAFDPTAYFKQLGLEGQLSPSRTNGLNSLAKAMLEATL
>Mature_147_residues
TDSTMPMPSEADFHYSVQDAETLLARFTKAPNWQERYRQIMLLGKDLPSLSPELRVEAAQVKGCESDAWIYHLEQAGKHY
YLADSDARIVKGLIGLLLGACHGKSRAEIQAFDPTAYFKQLGLEGQLSPSRTNGLNSLAKAMLEATL

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

Organism=Escherichia coli, GI1789176, Length=128, Percent_Identity=46.09375, Blast_Score=126, Evalue=6e-31,
Organism=Escherichia coli, GI1787969, Length=121, Percent_Identity=37.1900826446281, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017763
- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 16417; Mature: 16286

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSTMPMPSEADFHYSVQDAETLLARFTKAPNWQERYRQIMLLGKDLPSLSPELRVEAA
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHEEHHH
QVKGCESDAWIYHLEQAGKHYYLADSDARIVKGLIGLLLGACHGKSRAEIQAFDPTAYFK
HHCCCCCCHHEEEHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH
QLGLEGQLSPSRTNGLNSLAKAMLEATL
HCCCCCCCCCCHHCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDSTMPMPSEADFHYSVQDAETLLARFTKAPNWQERYRQIMLLGKDLPSLSPELRVEAA
CCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHEEHHH
QVKGCESDAWIYHLEQAGKHYYLADSDARIVKGLIGLLLGACHGKSRAEIQAFDPTAYFK
HHCCCCCCHHEEEHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH
QLGLEGQLSPSRTNGLNSLAKAMLEATL
HCCCCCCCCCCHHCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]