Click here to switch to the map view.

The map label for this gene is ydiY [C]

Identifier: 160876761

GI number: 160876761

Start: 4312370

End: 4313107

Strand: Reverse

Name: ydiY [C]

Synonym: Sbal195_3655

Alternate gene names: 160876761

Gene position: 4313107-4312370 (Counterclockwise)

Preceding gene: 160876762

Following gene: 160876760

Centisome position: 80.66

GC content: 44.04

Gene sequence:

>738_bases
ATGAAAAAAGTACTGACCGCAGCGATATTAATGACTGCACCTTTTATGGCGACTGCAGGGGCCGATTTTGTAAAAGGCGA
CAAGACATTCGCTGGTGAAGCTGAGTTAGGTGCCACTTTAACAACAGGTAACACTGAAACCTCATCATTTAAGGGACGTT
TAAATCTTAAGCATGAGCTTGGCGATTGGGAAAATCAGTACTTACTAGAAGGTTTATATAAAGAAGATACCGGTTCTGTC
ACCGCGAAACGCTATTTAGCAGGAGCACAGGGTAACTACAAGATGACAGACCGTAGTTACCTGTTTGCGAATGCCAATTA
TGAAGTCGACCCGTTTACCGGTTATGACTACACCCTATCTGGCGCAGCGGGTTATGGTCATAGACTGTATGACACCAGCA
AGACCTTTTTAGATGTTGAAGTGGGTCCGGGTTATATCTATCAACGTCTCGATACTGAGCAAGCGCTTATCGAAGGTTAT
GACACCAACGACAGCGTTGTTGCCCACGGCGTGATCAACTTCGAAACTGAAATCACTGAAACCTCTAAATTCCAACAGCG
TTTCGTTGCCGATTACGGTGACAAGTTAGATGCCCGTTCTGAAACCTCATTAACGGCAAATATTATCGGCGCATTGGCGA
TGAAGTTTGCCATTATTGTGCGTTATAACAGCGAGCCGCTGGATGATAAGAAAAGCACAGATACTGAAACCAATATGACC
TTGTTATATGCTTTCTAA

Upstream 100 bases:

>100_bases
GGGGAAAAAACTAACCCATATTAATATGTGCTTATCCAGCTTCGCTGGGACGAACAGATATTTATAGGGATTGGATTTAA
CGGAACAGGAACGGATAAAC

Downstream 100 bases:

>100_bases
TGCTGTGACACTGATTTAAAACAAAAAAGCACCTTCGAGGTGCTTTTTTATTGGCTGTTTTTAGACTAAGTTGAATATAC
GTTAAGCTTTTCTTTATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Orphan Protein; Conserved Protein YdiY; Exported Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKVLTAAILMTAPFMATAGADFVKGDKTFAGEAELGATLTTGNTETSSFKGRLNLKHELGDWENQYLLEGLYKEDTGSV
TAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTLSGAAGYGHRLYDTSKTFLDVEVGPGYIYQRLDTEQALIEGY
DTNDSVVAHGVINFETEITETSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
LLYAF

Sequences:

>Translated_245_residues
MKKVLTAAILMTAPFMATAGADFVKGDKTFAGEAELGATLTTGNTETSSFKGRLNLKHELGDWENQYLLEGLYKEDTGSV
TAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTLSGAAGYGHRLYDTSKTFLDVEVGPGYIYQRLDTEQALIEGY
DTNDSVVAHGVINFETEITETSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
LLYAF
>Mature_245_residues
MKKVLTAAILMTAPFMATAGADFVKGDKTFAGEAELGATLTTGNTETSSFKGRLNLKHELGDWENQYLLEGLYKEDTGSV
TAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTLSGAAGYGHRLYDTSKTFLDVEVGPGYIYQRLDTEQALIEGY
DTNDSVVAHGVINFETEITETSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
LLYAF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27092; Mature: 27092

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLTAAILMTAPFMATAGADFVKGDKTFAGEAELGATLTTGNTETSSFKGRLNLKHEL
CCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCC
GDWENQYLLEGLYKEDTGSVTAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTLS
CCCCHHHHHHHHHCCCCCCEEHHHHHCCCCCCEEECCCEEEEECCCEEECCCCCCCEEEC
GAAGYGHRLYDTSKTFLDVEVGPGYIYQRLDTEQALIEGYDTNDSVVAHGVINFETEITE
CCCCCCCEEEECCCEEEEEECCCCCEEECCCCHHHHHCCCCCCCCEEEEEEEEEEECCHH
TSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEE
LLYAF
EEEEC
>Mature Secondary Structure
MKKVLTAAILMTAPFMATAGADFVKGDKTFAGEAELGATLTTGNTETSSFKGRLNLKHEL
CCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCC
GDWENQYLLEGLYKEDTGSVTAKRYLAGAQGNYKMTDRSYLFANANYEVDPFTGYDYTLS
CCCCHHHHHHHHHCCCCCCEEHHHHHCCCCCCEEECCCEEEEECCCEEECCCCCCCEEEC
GAAGYGHRLYDTSKTFLDVEVGPGYIYQRLDTEQALIEGYDTNDSVVAHGVINFETEITE
CCCCCCCEEEECCCEEEEEECCCCCEEECCCCHHHHHCCCCCCCCEEEEEEEEEEECCHH
TSKFQQRFVADYGDKLDARSETSLTANIIGALAMKFAIIVRYNSEPLDDKKSTDTETNMT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEE
LLYAF
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA