| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876644
Identifier: 160876644
GI number: 160876644
Start: 4160451
End: 4161377
Strand: Direct
Name: 160876644
Synonym: Sbal195_3538
Alternate gene names: NA
Gene position: 4160451-4161377 (Clockwise)
Preceding gene: 160876641
Following gene: 160876645
Centisome position: 77.8
GC content: 48.0
Gene sequence:
>927_bases GTGAAGTCTTCGAATTTAGCGTACGTGTATGGCATGGCGGCGGTCTTCCTCTGGTCTACAGTGGCCACGGCCTTTAAGAT TGCCTTGAGTTACTACACGCCACTGCAACTGGTGTTTGTTGCCGTGCTCACGTCGATTATTGCCCTTGGCGGTATCCTGG CTTGGCAAAAAAAGCTTTCCTTACTCAAGCAACAGTTTTTACGCCGCCCTGCATTTTATCTAGTTACAGGGCTCATCAAT CCCTTCCTCTACTATGTCGTGCTATTTAAAGCGTATTCCTTACTGCCAGCGCAGCAAGCCTTGTCACTTAATTACACTTG GGCGGTATTACTGCCGTTACTGGCTGCGCCTTTGTTAAAGCAACATTTGCGTAAGAGCGACATTGCTGCGGCGCTGATTG CCTACACTGGGGTGTTTATCATTGCCACCGGCGGCGATATCAGCGGCTTTAGCTTTGATAGCCCGCTCGGGATCGGACTG GCGCTGACCAGCACCTTACTCTGGTGCCTATATTGGATCGTCAACACTAAAGATCAAGGCGATCCCGTGGTGAGTTTATT ATTGAGTTTTCTTATCGGCTTACCTTTTATTGCCGTCACCTTAGTACTAACAGATACCCTGCCCAGTTTTAGTCTTAAGG CGATATTTGCAGGTGTGTATGTGGGCTTATTTGAGATGGGCATTACCTTCGTGCTCTGGTTAATGGCGCTGAAAACCGCC ACTCGTACCGCGAACATCAGCACTATGGTGTTTTTATCCCCTGTAATGTCGATTGGTTTTATCGCGTGGATTTTGCAAGA AACAATTGCGATGGCGACCTATCTCGGCCTAGCGTTTATTTTATCAGGGATGATGTTGCAACAACTTTGGCCCCGTTATA CCGAGCGCAAAAGTAAGATAAGCCCAAAGCCAAAGCTCGCTGAATAA
Upstream 100 bases:
>100_bases GATAAAATATCCAAGCAGATAAAATAGTCTTGCTTATCAACCCAAGCTGTTATTCAATCTGCCCACATTTGTCGGATGTT TATCCAGGTAAGGTAGCAGA
Downstream 100 bases:
>100_bases TGACTGAGTCATCACTGAGTCGCCGCCTTAAACAAGCTTGGCTCACTGTAATGAGCCAATTAAAGAACGTAAAAACCGAA GTGGCTAACGTTTTACATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Domain-Containing Protein; Transporter Drug/Metabolite Exporter Family; DMT Family Permease; Drug/Metabolite Exporter Family Protein; DMT Superfamily Permease; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Transporter Permease; Permease DMT Superfamily; Permease Outative
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKSSNLAYVYGMAAVFLWSTVATAFKIALSYYTPLQLVFVAVLTSIIALGGILAWQKKLSLLKQQFLRRPAFYLVTGLIN PFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLLKQHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGL ALTSTLLWCLYWIVNTKDQGDPVVSLLLSFLIGLPFIAVTLVLTDTLPSFSLKAIFAGVYVGLFEMGITFVLWLMALKTA TRTANISTMVFLSPVMSIGFIAWILQETIAMATYLGLAFILSGMMLQQLWPRYTERKSKISPKPKLAE
Sequences:
>Translated_308_residues MKSSNLAYVYGMAAVFLWSTVATAFKIALSYYTPLQLVFVAVLTSIIALGGILAWQKKLSLLKQQFLRRPAFYLVTGLIN PFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLLKQHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGL ALTSTLLWCLYWIVNTKDQGDPVVSLLLSFLIGLPFIAVTLVLTDTLPSFSLKAIFAGVYVGLFEMGITFVLWLMALKTA TRTANISTMVFLSPVMSIGFIAWILQETIAMATYLGLAFILSGMMLQQLWPRYTERKSKISPKPKLAE >Mature_308_residues MKSSNLAYVYGMAAVFLWSTVATAFKIALSYYTPLQLVFVAVLTSIIALGGILAWQKKLSLLKQQFLRRPAFYLVTGLIN PFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLLKQHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGL ALTSTLLWCLYWIVNTKDQGDPVVSLLLSFLIGLPFIAVTLVLTDTLPSFSLKAIFAGVYVGLFEMGITFVLWLMALKTA TRTANISTMVFLSPVMSIGFIAWILQETIAMATYLGLAFILSGMMLQQLWPRYTERKSKISPKPKLAE
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33924; Mature: 33924
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSNLAYVYGMAAVFLWSTVATAFKIALSYYTPLQLVFVAVLTSIIALGGILAWQKKLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKQQFLRRPAFYLVTGLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLLK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH QHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGLALTSTLLWCLYWIVNTKDQG HHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC DPVVSLLLSFLIGLPFIAVTLVLTDTLPSFSLKAIFAGVYVGLFEMGITFVLWLMALKTA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRTANISTMVFLSPVMSIGFIAWILQETIAMATYLGLAFILSGMMLQQLWPRYTERKSKI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPKPKLAE CCCCCCCC >Mature Secondary Structure MKSSNLAYVYGMAAVFLWSTVATAFKIALSYYTPLQLVFVAVLTSIIALGGILAWQKKLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKQQFLRRPAFYLVTGLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLLK HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH QHLRKSDIAAALIAYTGVFIIATGGDISGFSFDSPLGIGLALTSTLLWCLYWIVNTKDQG HHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC DPVVSLLLSFLIGLPFIAVTLVLTDTLPSFSLKAIFAGVYVGLFEMGITFVLWLMALKTA CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRTANISTMVFLSPVMSIGFIAWILQETIAMATYLGLAFILSGMMLQQLWPRYTERKSKI HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPKPKLAE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA