| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876641
Identifier: 160876641
GI number: 160876641
Start: 4155928
End: 4156596
Strand: Direct
Name: 160876641
Synonym: Sbal195_3535
Alternate gene names: NA
Gene position: 4155928-4156596 (Clockwise)
Preceding gene: 160876640
Following gene: 160876644
Centisome position: 77.72
GC content: 37.97
Gene sequence:
>669_bases ATGGCTAATAAAAAACACCCAATAACACGCAAAAAAATGCATCCGACATCAATAACCAGATCTGAGTCCACTCTCAAGAT AGGAAGAAAAAGTAGGCAGCTTTACTCTCAAAATTCAATTAAGCAGCACACGGATACCTGTGCAGATCGTGAATTTGAAT CTGAGTTCCTAAAACAACAAAACGAATCAAACAGCATGTTACTCTGCTCACTCCCTCTCGGTAATAGTATGAATAATTTA CTATTTACCGCTCCTGAAGCCGCACTACCAAATACCGGAAGTCCGGTTTATGAATTACTTTTAATTCTATCTGATGGCAA CAAGCATGCTAGAGATCATCTTTGTAATTTGCTTGGTGGTGGCTTTAGAGGCTATCTACAAAAACTAACAGGAGAGTGTT ACCAGTACTGGTTTATACACTCAGAGCAAAGTGAATATAACGGTAAGAGGCAAGCTTTATATTGGCTTGATGAGAGTCAC TTTTCTTGCGATTTGCAACAAGACAAAGATGCTAGGACTATCGCAAAAAAACAATATAAAGACCGCTCGTATTATGGCAG TAAGAGTGCAGTTAAACGTTTACAGCAAGCAGAACAAGATAAAGTGGATGCTGATACAGAGTATCAACAACGAATAGGGA GCAATACCGAAAAAATTAAAAATCTATAA
Upstream 100 bases:
>100_bases TTATTTCTTTATTAGAATAACAAATAAGCCGTTTATTTGTTTTTGAACAAAAAAGCTATATGTGAATAATAAGAGGTCAG TGAACCAAAGAGGAACTGAC
Downstream 100 bases:
>100_bases CTTTTATGCCTTAATGATTTACCAATAACACCAGAATCTAAGGAATACACCATCCCCTCGGAGTTGCCGCAGGGCGAATA GACAAATTGCGTGAGTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MANKKHPITRKKMHPTSITRSESTLKIGRKSRQLYSQNSIKQHTDTCADREFESEFLKQQNESNSMLLCSLPLGNSMNNL LFTAPEAALPNTGSPVYELLLILSDGNKHARDHLCNLLGGGFRGYLQKLTGECYQYWFIHSEQSEYNGKRQALYWLDESH FSCDLQQDKDARTIAKKQYKDRSYYGSKSAVKRLQQAEQDKVDADTEYQQRIGSNTEKIKNL
Sequences:
>Translated_222_residues MANKKHPITRKKMHPTSITRSESTLKIGRKSRQLYSQNSIKQHTDTCADREFESEFLKQQNESNSMLLCSLPLGNSMNNL LFTAPEAALPNTGSPVYELLLILSDGNKHARDHLCNLLGGGFRGYLQKLTGECYQYWFIHSEQSEYNGKRQALYWLDESH FSCDLQQDKDARTIAKKQYKDRSYYGSKSAVKRLQQAEQDKVDADTEYQQRIGSNTEKIKNL >Mature_221_residues ANKKHPITRKKMHPTSITRSESTLKIGRKSRQLYSQNSIKQHTDTCADREFESEFLKQQNESNSMLLCSLPLGNSMNNLL FTAPEAALPNTGSPVYELLLILSDGNKHARDHLCNLLGGGFRGYLQKLTGECYQYWFIHSEQSEYNGKRQALYWLDESHF SCDLQQDKDARTIAKKQYKDRSYYGSKSAVKRLQQAEQDKVDADTEYQQRIGSNTEKIKNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25551; Mature: 25420
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKKHPITRKKMHPTSITRSESTLKIGRKSRQLYSQNSIKQHTDTCADREFESEFLKQQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NESNSMLLCSLPLGNSMNNLLFTAPEAALPNTGSPVYELLLILSDGNKHARDHLCNLLGG CCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHEEHHCCCCHHHHHHHHHHHCC GFRGYLQKLTGECYQYWFIHSEQSEYNGKRQALYWLDESHFSCDLQQDKDARTIAKKQYK HHHHHHHHHHHHHHHHHEEECCCHHCCCCEEEEEEECCCCCEECCCCCCHHHHHHHHHHH DRSYYGSKSAVKRLQQAEQDKVDADTEYQQRIGSNTEKIKNL HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCC >Mature Secondary Structure ANKKHPITRKKMHPTSITRSESTLKIGRKSRQLYSQNSIKQHTDTCADREFESEFLKQQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NESNSMLLCSLPLGNSMNNLLFTAPEAALPNTGSPVYELLLILSDGNKHARDHLCNLLGG CCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHEEHHCCCCHHHHHHHHHHHCC GFRGYLQKLTGECYQYWFIHSEQSEYNGKRQALYWLDESHFSCDLQQDKDARTIAKKQYK HHHHHHHHHHHHHHHHHEEECCCHHCCCCEEEEEEECCCCCEECCCCCCHHHHHHHHHHH DRSYYGSKSAVKRLQQAEQDKVDADTEYQQRIGSNTEKIKNL HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA