| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876298
Identifier: 160876298
GI number: 160876298
Start: 3764318
End: 3765139
Strand: Reverse
Name: 160876298
Synonym: Sbal195_3192
Alternate gene names: NA
Gene position: 3765139-3764318 (Counterclockwise)
Preceding gene: 160876299
Following gene: 160876297
Centisome position: 70.41
GC content: 44.89
Gene sequence:
>822_bases ATGAAATTAAATAAGCTATTAACTGGATTTGCCTTATCCGGCGTGATTTTAGGGACATCTGGCCTACAGTTGGTGCAAGC GCAAACAGAGCCTAAAGTCGATGAACGTTGTGAAGTCTCTTTAAATTATGACGTTATGGTTGAGCCTAAAAAATTAGTCA TGAGTGAGAAGGGCACCGAAAAGTATCGCATCGAAGTCGATAAGTTATTTGTTGAAGGCAAACAAGTAAACTTAACCGAT AAGCAAAGAAAGTTAGTAACTCAATACGCCGATGAAGTGTCGACGCAAGTGCCTGAAGTGATTGAAGTCGTGAACGAGGC CGTCGCATTAGCGTCCCAAGCGGTGAGCATGGCGTTAACCCCTTTAATGGGCGATGCGGCCGGTGCTAAGTTCGATGAAA TGATGGCAGGTGTCCAAAAGCGCGTTGATTCAGTGGCCTACCGTCATGGCGATAGCTTCTATCTCGGTGCGACGGAAGAC TCAATTCAGAACACCTTTAACGACGAATTCGAGCAGGAAATGGAGCAAATTGTTCAGAACTCAGTGGGCACCATTATGAT GACCATAGGTGGCCAAATCATGTCGGGTGACGGTGATAGTTTTGAAGCCAAGATGGATGCCTTCTCCAAGAAAATGGACA ACTTAGGCCAAGATATTGAGCAACAAATTGAGAGTCAATCTAAGGGACTGGAAGCTAAGGCTGATCGTTTATGCGACCGA TTTGAAAATCTGTTAGTGCTTGAAAATCAATTACGCCAAGAAGTACCAGAACTCGCGCCTTATGCGTTGACACAAAACTC AACCAAGGAGCTGCGTGAATAG
Upstream 100 bases:
>100_bases ATTCAACATAATCATATTGTTATAAAGTTGGCACGTCTCCTGCTACAAGCTATTCAGTAGTTTAGGTTTATCGAATTATT CAGATTAAAGGACGAACAAC
Downstream 100 bases:
>100_bases TTCTTGTTAATCGTCCTTACTAATAGTTTTTGTGAATAGCCCTTAGTTTTAACTGCATTAACTTCTATCTCCTTGTGCAT GAGTCAAATTTGAATGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKLNKLLTGFALSGVILGTSGLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTEKYRIEVDKLFVEGKQVNLTD KQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALTPLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATED SIQNTFNDEFEQEMEQIVQNSVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR FENLLVLENQLRQEVPELAPYALTQNSTKELRE
Sequences:
>Translated_273_residues MKLNKLLTGFALSGVILGTSGLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTEKYRIEVDKLFVEGKQVNLTD KQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALTPLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATED SIQNTFNDEFEQEMEQIVQNSVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR FENLLVLENQLRQEVPELAPYALTQNSTKELRE >Mature_273_residues MKLNKLLTGFALSGVILGTSGLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTEKYRIEVDKLFVEGKQVNLTD KQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALTPLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATED SIQNTFNDEFEQEMEQIVQNSVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR FENLLVLENQLRQEVPELAPYALTQNSTKELRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30324; Mature: 30324
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKLLTGFALSGVILGTSGLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTE CCHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCEEEEECCEEEECHHHHHHCCCCCC KYRIEVDKLFVEGKQVNLTDKQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALT HHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATEDSIQNTFNDEFEQEMEQIVQN HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH SVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR CCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FENLLVLENQLRQEVPELAPYALTQNSTKELRE HHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCC >Mature Secondary Structure MKLNKLLTGFALSGVILGTSGLQLVQAQTEPKVDERCEVSLNYDVMVEPKKLVMSEKGTE CCHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCEEEEECCEEEECHHHHHHCCCCCC KYRIEVDKLFVEGKQVNLTDKQRKLVTQYADEVSTQVPEVIEVVNEAVALASQAVSMALT HHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLMGDAAGAKFDEMMAGVQKRVDSVAYRHGDSFYLGATEDSIQNTFNDEFEQEMEQIVQN HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH SVGTIMMTIGGQIMSGDGDSFEAKMDAFSKKMDNLGQDIEQQIESQSKGLEAKADRLCDR CCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FENLLVLENQLRQEVPELAPYALTQNSTKELRE HHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA