| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is glsA [H]
Identifier: 160876299
GI number: 160876299
Start: 3765322
End: 3766236
Strand: Reverse
Name: glsA [H]
Synonym: Sbal195_3193
Alternate gene names: 160876299
Gene position: 3766236-3765322 (Counterclockwise)
Preceding gene: 160876300
Following gene: 160876298
Centisome position: 70.43
GC content: 48.09
Gene sequence:
>915_bases ATGCCCGAGTTGGCATTACTTGAGGAAGTGGTCGAGAAAGTTCGACCCTTGCTCGGCCAAGGAAAGGTTGCAGATTACAT CCCCGCACTGGCCAGCGTTGATGCTGGCAAGTTAGGCATTGCCGTCACAACTGTTGATGGTGAAACCTTAGGTGCGGGCG ATTACCTTGAGCCGTTTTCGATTCAAAGTATCTCCAAAGTTTTCAGCTTAACCTTAGCGTTAACTTTATATGAAGAAGCC GAAATTTGGAGCCGAGTTGGCAAAGAACCTTCTGGCCATTCATTTAACTCTTTAGTACAAGTCGAGTTAGAACGTGGCAA GCCGCGTAATCCATTTATCAATGCTGGCGCGTTAGTGATTGCTGACTTATTGCAGAGCCGTTTAGGTGCGCCTAAACACA GAATGCTCGAGTTAGTCAGGCAACTAAGCCAAAATGATAAAGTGAGTTTCGACAAACAAGTGGCCGACTCAGAATATCAG CACAGTGCGCGCAATGCGGCGATTGCTTATTTGATGAAGTCCTTTGGTAATTTTCAAGGCGATGTCGATACTGTGCTGCG CACGTATTTTCATTACTGCGCCTTAAAGATGAATTGTGCTGACTTGTCTAAGGCCATGTTGTACTTGGCTAATCGCGGCA AAAGCATAACTGGGACTGAGCTTATCTCTCAGGTGCAAACTCGGCAGCTTAATGCCCTGTTGGCGACCTCGGGCCTATAC GATGGAGCGGGTGAGTTTGCCTATCGTGTTGGTATGCCAGGTAAAAGTGGCGTCGGTGGTGGCATCATTGCCGTTATTCC TGGGGAACTGTCGATTTGTGTTTGGTCGCCAGAACTCGATGGCAATGGCAATTCGCTTGCTGGCACTGCCATGCTTGAGC ACTTAAGTCAGCGTCTTGGCCGATCTATTTTCTAG
Upstream 100 bases:
>100_bases AATGTACCGAAGAAGATATTGCTGCAGTTAAGGCATTCTGGGCGAACCAAAAAGTTTCTCAGGTTGAAGTTAGCGAACTG TACGACATTTGGTGGGGTTA
Downstream 100 bases:
>100_bases CTTTACCTCTCGTTTTTATTAGCACTATCAGACTAAAAGTTAGCGAATTTCGCTAATGACCTTTTAGTGCTAACTTTCCT AAATTCAACATAATCATATT
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKLGIAVTTVDGETLGAGDYLEPFSIQSISKVFSLTLALTLYEEA EIWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVIADLLQSRLGAPKHRMLELVRQLSQNDKVSFDKQVADSEYQ HSARNAAIAYLMKSFGNFQGDVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLY DGAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLGRSIF
Sequences:
>Translated_304_residues MPELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKLGIAVTTVDGETLGAGDYLEPFSIQSISKVFSLTLALTLYEEA EIWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVIADLLQSRLGAPKHRMLELVRQLSQNDKVSFDKQVADSEYQ HSARNAAIAYLMKSFGNFQGDVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLY DGAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLGRSIF >Mature_303_residues PELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKLGIAVTTVDGETLGAGDYLEPFSIQSISKVFSLTLALTLYEEAE IWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVIADLLQSRLGAPKHRMLELVRQLSQNDKVSFDKQVADSEYQH SARNAAIAYLMKSFGNFQGDVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLYD GAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLGRSIF
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=294, Percent_Identity=36.0544217687075, Blast_Score=177, Evalue=7e-45, Organism=Homo sapiens, GI20336214, Length=294, Percent_Identity=34.0136054421769, Blast_Score=162, Evalue=5e-40, Organism=Escherichia coli, GI1787804, Length=301, Percent_Identity=64.1196013289037, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI1786693, Length=289, Percent_Identity=36.3321799307958, Blast_Score=178, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17507019, Length=296, Percent_Identity=36.1486486486487, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17532727, Length=297, Percent_Identity=33.3333333333333, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI193204073, Length=310, Percent_Identity=32.9032258064516, Blast_Score=161, Evalue=4e-40, Organism=Caenorhabditis elegans, GI193204075, Length=312, Percent_Identity=32.6923076923077, Blast_Score=160, Evalue=7e-40, Organism=Drosophila melanogaster, GI24653164, Length=285, Percent_Identity=35.4385964912281, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI281363241, Length=285, Percent_Identity=35.4385964912281, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653166, Length=285, Percent_Identity=35.4385964912281, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653162, Length=285, Percent_Identity=35.4385964912281, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653156, Length=285, Percent_Identity=35.4385964912281, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653158, Length=285, Percent_Identity=35.4385964912281, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI281363239, Length=285, Percent_Identity=35.4385964912281, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI116008307, Length=285, Percent_Identity=35.4385964912281, Blast_Score=172, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR015868 [H]
Pfam domain/function: PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 32782; Mature: 32651
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKLGIAVTTVDGETLGAGDYLEPFS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCH IQSISKVFSLTLALTLYEEAEIWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCCCCCCHHHHH ADLLQSRLGAPKHRMLELVRQLSQNDKVSFDKQVADSEYQHSARNAAIAYLMKSFGNFQG HHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLY CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DGAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLG CCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC RSIF CCCC >Mature Secondary Structure PELALLEEVVEKVRPLLGQGKVADYIPALASVDAGKLGIAVTTVDGETLGAGDYLEPFS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCH IQSISKVFSLTLALTLYEEAEIWSRVGKEPSGHSFNSLVQVELERGKPRNPFINAGALVI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCCCCCCHHHHH ADLLQSRLGAPKHRMLELVRQLSQNDKVSFDKQVADSEYQHSARNAAIAYLMKSFGNFQG HHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVDTVLRTYFHYCALKMNCADLSKAMLYLANRGKSITGTELISQVQTRQLNALLATSGLY CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DGAGEFAYRVGMPGKSGVGGGIIAVIPGELSICVWSPELDGNGNSLAGTAMLEHLSQRLG CCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC RSIF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA