| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yafP [H]
Identifier: 160876263
GI number: 160876263
Start: 3732587
End: 3733111
Strand: Reverse
Name: yafP [H]
Synonym: Sbal195_3157
Alternate gene names: 160876263
Gene position: 3733111-3732587 (Counterclockwise)
Preceding gene: 160876264
Following gene: 160876260
Centisome position: 69.81
GC content: 47.24
Gene sequence:
>525_bases ATGAAGATCCGACTATTTACGCCATCGGATGTCTCGCAGCTGGCGGCGATCTTTGAGGCGAGTGTAATGCAAGGCTCTGG CGAGTTTTACTCGTTTGCCGAACGCTCTGCATGGGCTTATATCGAAGGTGAGATCCGCAGTGAGAACTATTGGCTCGAAC GCTTAAAGGGCACCACGATTTGGGTTGCTGAAGCCGATAACATGCTGGTGGGATTTATCAATCTTAAGATAGGTGCTGAC AGTGAAGTTGAAGCCGCTGCTGAAGTGGAATGTCTGTTCGTGCATCCCGAATATGCCCGTTCTGGGGTGGCCACCTCTTT GTATTTTGCGTTGTTTGAAGAAGTTAAAATTTTAGCGCTGAAACGATTAACGGTTGAAGCATCCTATCTCGCGCGACCTT TTTTTGAAAAACAAGGATTTCGCAGTATTCGCCGTAATGAACATAAGCGTTTTTTGAATGCGGCGGATAAAGCACAGGGC CAAGCCCAAGTGTTGGTTAATTTCAGCATGACACTCGCGCTTTAA
Upstream 100 bases:
>100_bases GCCGTTGAGTGACACGATTTAAGTTAAATCAGCACTATTTAACTTAAATTAGAATACGGTTAATCTTAAGCGATTAACAA TTCAAGATGGAGGGCAGAGA
Downstream 100 bases:
>100_bases CTCAGCTTATCAAAGTGCGGGTCTGGTTCGCTCAACGAGGCCGTTAGCACTGCTTTTATAACATCGCCTTATAACATGAC CATAAAAACGCCAATAAAAA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKIRLFTPSDVSQLAAIFEASVMQGSGEFYSFAERSAWAYIEGEIRSENYWLERLKGTTIWVAEADNMLVGFINLKIGAD SEVEAAAEVECLFVHPEYARSGVATSLYFALFEEVKILALKRLTVEASYLARPFFEKQGFRSIRRNEHKRFLNAADKAQG QAQVLVNFSMTLAL
Sequences:
>Translated_174_residues MKIRLFTPSDVSQLAAIFEASVMQGSGEFYSFAERSAWAYIEGEIRSENYWLERLKGTTIWVAEADNMLVGFINLKIGAD SEVEAAAEVECLFVHPEYARSGVATSLYFALFEEVKILALKRLTVEASYLARPFFEKQGFRSIRRNEHKRFLNAADKAQG QAQVLVNFSMTLAL >Mature_174_residues MKIRLFTPSDVSQLAAIFEASVMQGSGEFYSFAERSAWAYIEGEIRSENYWLERLKGTTIWVAEADNMLVGFINLKIGAD SEVEAAAEVECLFVHPEYARSGVATSLYFALFEEVKILALKRLTVEASYLARPFFEKQGFRSIRRNEHKRFLNAADKAQG QAQVLVNFSMTLAL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1786428, Length=146, Percent_Identity=37.6712328767123, Blast_Score=89, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 19663; Mature: 19663
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRLFTPSDVSQLAAIFEASVMQGSGEFYSFAERSAWAYIEGEIRSENYWLERLKGTTI CEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEEEECCHHHHHHHCCCEE WVAEADNMLVGFINLKIGADSEVEAAAEVECLFVHPEYARSGVATSLYFALFEEVKILAL EEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHH KRLTVEASYLARPFFEKQGFRSIRRNEHKRFLNAADKAQGQAQVLVNFSMTLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEC >Mature Secondary Structure MKIRLFTPSDVSQLAAIFEASVMQGSGEFYSFAERSAWAYIEGEIRSENYWLERLKGTTI CEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEEEECCHHHHHHHCCCEE WVAEADNMLVGFINLKIGADSEVEAAAEVECLFVHPEYARSGVATSLYFALFEEVKILAL EEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHHHH KRLTVEASYLARPFFEKQGFRSIRRNEHKRFLNAADKAQGQAQVLVNFSMTLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7596361; 9278503 [H]