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The map label for this gene is yeeY [H]

Identifier: 160876260

GI number: 160876260

Start: 3730045

End: 3730938

Strand: Reverse

Name: yeeY [H]

Synonym: Sbal195_3154

Alternate gene names: 160876260

Gene position: 3730938-3730045 (Counterclockwise)

Preceding gene: 160876263

Following gene: 160876257

Centisome position: 69.77

GC content: 52.35

Gene sequence:

>894_bases
ATGTTGCCATCTATTAGTCTCGATGGATTAATCGTACTCGATGCCATTGATAGAAAAGGCAGTTTTTCCGCAGCGGCCGA
GTCCTTGTTCCGAGTGCCGTCGGCGCTGACTTACACAGTGCAGAAACTGGAAAGCGATTTAGGCACAAAATTATTTGAAC
GTAAGGGCCAACGCGCCGAACTGACCTTAGTCGGCCAACTTGTGCTGCGCCAAGGGCGAGAAATCCTTTCGGCAACGTCT
AGGCTGGAAGAAGCGGTACGTCAACTCGAGACCGGCTGGGAGTCTTCGTTAACCTTAGCAATCGATACCGTCGTGCCGGA
TTTACCCCTATTGCAGTTGATTGGGGAATTTACCGAGCTGGGTAAGCAAGTGACGGTGAACATCAGTGAAGAGTCCTTAG
GTGGCGGCTGGGATGCACTCTATTCGGGCCGTGCCGATATTGCCATCGGCGTGACGGGTGAACTGCCAAAAGGTCAATAT
CATGTGGTCGAAATCGGTGAGTTGGAGTTTGTGTTTGCCTTAAATCCTGCCCACCAATTGGCGCAACATGCGGGTCCTAT
TCCGACCGAGGCATTGTTGCAATTCCCCTCCATTGTGGTGGCTGACAGTTCGACGGCCTTGGCGCAGCGATCGAGCGGTT
TATTTGATAGTCGCCAAGTGATCCGGGTGCCGAATATGCAGACCAAGATTAAAGCGCAGCAATTGGGACTTGGCGTAGGC
TACATTCCAAAACACTTGATTTTGGATGCGTTGGCGGCGCGAAGTTTAGTGGCTTGTCATGTGGAAATGCCGCGCCCACC
CCAAGCTGTGTTTATGGCGTGGCGTAAAGACGCGCAGGGCAAGGCAAAGGATTGGTTTACTGAGCGCTTGCCACAATGCG
ACTGGCAGTTTTAG

Upstream 100 bases:

>100_bases
TAGAACCTCTCCATTGCTAAGCAGTGTAGACTTGACCTTTGACAAAGAAAATCGGAACATTTTCAATGTCGACTTCAAAT
AATTTGAATATGAGGTTTTT

Downstream 100 bases:

>100_bases
GCGCCTAGCAATTTTAGATAGCTGACCATTTTAGATCACGGGCAATGAGAGCAACGTTTGTTTTGCATCACTGTCTATTC
AACGTTTTCTATGTCGTCAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MLPSISLDGLIVLDAIDRKGSFSAAAESLFRVPSALTYTVQKLESDLGTKLFERKGQRAELTLVGQLVLRQGREILSATS
RLEEAVRQLETGWESSLTLAIDTVVPDLPLLQLIGEFTELGKQVTVNISEESLGGGWDALYSGRADIAIGVTGELPKGQY
HVVEIGELEFVFALNPAHQLAQHAGPIPTEALLQFPSIVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLGVG
YIPKHLILDALAARSLVACHVEMPRPPQAVFMAWRKDAQGKAKDWFTERLPQCDWQF

Sequences:

>Translated_297_residues
MLPSISLDGLIVLDAIDRKGSFSAAAESLFRVPSALTYTVQKLESDLGTKLFERKGQRAELTLVGQLVLRQGREILSATS
RLEEAVRQLETGWESSLTLAIDTVVPDLPLLQLIGEFTELGKQVTVNISEESLGGGWDALYSGRADIAIGVTGELPKGQY
HVVEIGELEFVFALNPAHQLAQHAGPIPTEALLQFPSIVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLGVG
YIPKHLILDALAARSLVACHVEMPRPPQAVFMAWRKDAQGKAKDWFTERLPQCDWQF
>Mature_297_residues
MLPSISLDGLIVLDAIDRKGSFSAAAESLFRVPSALTYTVQKLESDLGTKLFERKGQRAELTLVGQLVLRQGREILSATS
RLEEAVRQLETGWESSLTLAIDTVVPDLPLLQLIGEFTELGKQVTVNISEESLGGGWDALYSGRADIAIGVTGELPKGQY
HVVEIGELEFVFALNPAHQLAQHAGPIPTEALLQFPSIVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLGVG
YIPKHLILDALAARSLVACHVEMPRPPQAVFMAWRKDAQGKAKDWFTERLPQCDWQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=285, Percent_Identity=36.8421052631579, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1787949, Length=283, Percent_Identity=34.2756183745583, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1789492, Length=290, Percent_Identity=33.448275862069, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1786713, Length=284, Percent_Identity=30.6338028169014, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1786508, Length=291, Percent_Identity=28.5223367697594, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32467; Mature: 32467

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSISLDGLIVLDAIDRKGSFSAAAESLFRVPSALTYTVQKLESDLGTKLFERKGQRAE
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
LTLVGQLVLRQGREILSATSRLEEAVRQLETGWESSLTLAIDTVVPDLPLLQLIGEFTEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHC
GKQVTVNISEESLGGGWDALYSGRADIAIGVTGELPKGQYHVVEIGELEFVFALNPAHQL
CCEEEEEECHHCCCCCHHHHHCCCCCEEEEECCCCCCCCEEEEEECCEEEEEEECHHHHH
AQHAGPIPTEALLQFPSIVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLGVG
HHHCCCCCHHHHHHCCCEEEECCCHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCCC
YIPKHLILDALAARSLVACHVEMPRPPQAVFMAWRKDAQGKAKDWFTERLPQCDWQF
HHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLPSISLDGLIVLDAIDRKGSFSAAAESLFRVPSALTYTVQKLESDLGTKLFERKGQRAE
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
LTLVGQLVLRQGREILSATSRLEEAVRQLETGWESSLTLAIDTVVPDLPLLQLIGEFTEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHC
GKQVTVNISEESLGGGWDALYSGRADIAIGVTGELPKGQYHVVEIGELEFVFALNPAHQL
CCEEEEEECHHCCCCCHHHHHCCCCCEEEEECCCCCCCCEEEEEECCEEEEEEECHHHHH
AQHAGPIPTEALLQFPSIVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLGVG
HHHCCCCCHHHHHHCCCEEEECCCHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCCC
YIPKHLILDALAARSLVACHVEMPRPPQAVFMAWRKDAQGKAKDWFTERLPQCDWQF
HHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]