| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is yafP [C]
Identifier: 160876264
GI number: 160876264
Start: 3733279
End: 3733890
Strand: Reverse
Name: yafP [C]
Synonym: Sbal195_3158
Alternate gene names: 160876264
Gene position: 3733890-3733279 (Counterclockwise)
Preceding gene: 160876265
Following gene: 160876263
Centisome position: 69.83
GC content: 45.26
Gene sequence:
>612_bases ATGCCGCAAAATTTGAGTCTATCTCGATTAAGCGAAACGCGGCAAAATAGCACTATTGCTAGCGGTTATTACTCAACAGA GAACACTCAAGTGACGGCGTTTGAACAGTTCGAGATCCAGCCTTATCAGTCATGTCATGCCCGTGAGGTGAGTGAATTAT TTCATCTTTGTGTGCATAACATCACCCATGCTCGTTATTCACAGGCGCAACTTGCTGCTTGGTCTGCGGCGCCAAGATCG GCTAAACATTGGGATTTGCGCTTAAACCGCTCGAAGGCGTGGGTAGTATTAGTCAAAGATGCAGCGACAGCTTCTTCAAT GTGCTGCGGTTTTATCAATGTCGAAACCCATTTTACCCACCAAGGTTATGTAGACAGCTTATATATCCATCCAGATTATC AAGCTAAGGGATTGGGTGAGCGCGCCTATCGTGTTTTAGAAGCGTGGGCTAAGGCGCAAGGCTATGCGCGCTTGAGTGTA GACGCCTCTTATCTCTCTAAAGGGTTATTTACCCGTATGGGATTCATTCAAATACAGCGCAGTTATCAGCAAAAACTTGG GCAAGTGATCCCGGGCTTCTATATGGAGAAGAATATGGAAAAGAATATTTAA
Upstream 100 bases:
>100_bases TCGATAAGAAATAGTCAGCAGTATCGAGTGCGCTAACCTGTGCGCCTCTTTAATCCAACGGCTTCGATACCTTCGAGGCC GTTTTTGTTTTTAGCCTTCA
Downstream 100 bases:
>100_bases CGTTAGCTTACTAGGGTTTCAACCAAAAAGTGATGTAAGGTATTCCACAGTAAAACATTAGCTTAACGCCGTTGAGTGAC ACGATTTAAGTTAAATCAGC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase YafP; Acetyltransferase Gnat Family
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPQNLSLSRLSETRQNSTIASGYYSTENTQVTAFEQFEIQPYQSCHAREVSELFHLCVHNITHARYSQAQLAAWSAAPRS AKHWDLRLNRSKAWVVLVKDAATASSMCCGFINVETHFTHQGYVDSLYIHPDYQAKGLGERAYRVLEAWAKAQGYARLSV DASYLSKGLFTRMGFIQIQRSYQQKLGQVIPGFYMEKNMEKNI
Sequences:
>Translated_203_residues MPQNLSLSRLSETRQNSTIASGYYSTENTQVTAFEQFEIQPYQSCHAREVSELFHLCVHNITHARYSQAQLAAWSAAPRS AKHWDLRLNRSKAWVVLVKDAATASSMCCGFINVETHFTHQGYVDSLYIHPDYQAKGLGERAYRVLEAWAKAQGYARLSV DASYLSKGLFTRMGFIQIQRSYQQKLGQVIPGFYMEKNMEKNI >Mature_202_residues PQNLSLSRLSETRQNSTIASGYYSTENTQVTAFEQFEIQPYQSCHAREVSELFHLCVHNITHARYSQAQLAAWSAAPRSA KHWDLRLNRSKAWVVLVKDAATASSMCCGFINVETHFTHQGYVDSLYIHPDYQAKGLGERAYRVLEAWAKAQGYARLSVD ASYLSKGLFTRMGFIQIQRSYQQKLGQVIPGFYMEKNMEKNI
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 23184; Mature: 23053
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQNLSLSRLSETRQNSTIASGYYSTENTQVTAFEQFEIQPYQSCHAREVSELFHLCVHN CCCCCCHHHHHHHHCCCCEECCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH ITHARYSQAQLAAWSAAPRSAKHWDLRLNRSKAWVVLVKDAATASSMCCGFINVETHFTH HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHEEEEEEEEEECC QGYVDSLYIHPDYQAKGLGERAYRVLEAWAKAQGYARLSVDASYLSKGLFTRMGFIQIQR CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHH SYQQKLGQVIPGFYMEKNMEKNI HHHHHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure PQNLSLSRLSETRQNSTIASGYYSTENTQVTAFEQFEIQPYQSCHAREVSELFHLCVHN CCCCCHHHHHHHHCCCCEECCEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH ITHARYSQAQLAAWSAAPRSAKHWDLRLNRSKAWVVLVKDAATASSMCCGFINVETHFTH HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHEEEEEEEEEECC QGYVDSLYIHPDYQAKGLGERAYRVLEAWAKAQGYARLSVDASYLSKGLFTRMGFIQIQR CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHH SYQQKLGQVIPGFYMEKNMEKNI HHHHHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA