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The map label for this gene is rpfG [H]

Identifier: 160876123

GI number: 160876123

Start: 3583166

End: 3584707

Strand: Reverse

Name: rpfG [H]

Synonym: Sbal195_3014

Alternate gene names: 160876123

Gene position: 3584707-3583166 (Counterclockwise)

Preceding gene: 160876126

Following gene: 160876122

Centisome position: 67.04

GC content: 46.82

Gene sequence:

>1542_bases
GTGGCGTTATTTAAGAAAAGTGCTGATGTTATCGAGGATAAATCCCATAAGCCTAAACAAGGCATTTGGAAAGTTGCCAT
TATTGATGATGAGCCTGGGATCCATGAGGTGACTCGATTTGCCCTGAAAAATCTGACCTTAGATAATCGGGTATTACAGT
TCTATTCCTGTTACAGCGCCGCTGAAGGCTTAGCGTTACTTCAAACTGAAACGGATATCGCATTGGCTTTTATTGATGTG
GTCATGGAAACCGACCATGCCGGGTTAGAGCTAGTTCAAAAAATCCGTACTGAATTAAATAATCACAGCACCCGCATCAT
TTTGCGTACGGGTCAGCCGGGGCAGGCGCCTGAAGATCAAGTGATTCGGGACTTTGATATTAACGATTACAAGGCCAAAA
CAGAACTTACCGCGGCTCGGCTTAAGTCTTGTGTCTACACTTCACTGCGTTCCTATCGCGATATTAAAATCATCGAGCAA
AGCCAGAAGGGGATGGAGAAAGTCATTGCCGCCTCCACCTCTGTACTTAAAAGCCACACATTACATAATTTTGGCAGTGC
GGTGCTTGAACAGACTTTACAGTTACTCAATCTTGAAAGCTCAGCCCTTTATCTCACCAGCTATCATCAAGACCTTTACC
TCGATACCCAAATGAATCTTCTGGCCGCCACGGGTGAGATGATCAGTTACTGCGAAGGTGGCAGCGTTGAGACACTACCT
GGGGATGTACGTGAGTATATTATCGAGGCTATCGCGCTAAAAACCTCGCTCGTTCGTGACAATATTTACGTTGGTTTTTA
TGAGCTAAGTGGCCATGTCACCAGTATTTTATATTTGCAGCACAATACTAAGTTAACGGATTTTCAAGTCAGTATTCTTG
AGCTATTTGCGGCCAATGTGAGCTTAACTTTCGAGAATTTGTCGGGCCGTGAAAATGTGCAGCAGACGCAAAGGGAGCTG
ATTTTAATCATAGGTGACGCCATTGAGCAGCGCAGTAAAGAGACCGGGGCCCATGTACGTCGGGTTGCGCGCATGACTGA
AATGCTCGCGATTGCCATCGGCATGCACGCGGACTTTATCGAAACGATTCGATATGCTGCGCCGCTGCACGATGTGGGTA
AAATAGGTATCCCTGAGAGTATTTTGCATAAGCCAGGCAAACTCGATGCCGAGGAATGGGCGATCATGCAAACCCATGCC
GAGAAAGGCTATAACTTGCTCGCTGGCTCAAATCGTATTATTGCCAAAATGGGTGCCCGAATTGCTTATACCCACCATGA
GCGTTGGGATGGGCAAGGTTATCCCCGTGGAATTGCTAAGGAAGAAATCCCCATTGAAGGCCGACTCATGGCGATTGTCG
ATGTGATTGATGCGTTGCTTTCCAAGCGCAGTTATAAAGAGGCGTGGTCAGTCGATGCGGTGCGAGAGTATATTTTGGCG
CAATCGGGTAAGCAGTTTGACCCCGTATTGTGTGAAGCTAGCCTAAAACTGTTAGATGCGTTTGCCTCCCTACATATCCA
CATTCCGGACGAACCGCTATGA

Upstream 100 bases:

>100_bases
AGTCTGTAACCAATAAGATGATAATTTATCCTTTGAAACTAGTCACTTTTGAGATTGAATCTATACTAAAGCTTAACTAT
TCATCGTAGACGGTGGTTCT

Downstream 100 bases:

>100_bases
CCCGAATGCTTGATCGAATCCTATTTGATGTCAGTAAGTCTCAGGTTATTGATGAGGGCGATCTCATTCAAGCATCACAA
CTTATAGTGAGTTCAATCTG

Product: response regulator receiver modulated metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MALFKKSADVIEDKSHKPKQGIWKVAIIDDEPGIHEVTRFALKNLTLDNRVLQFYSCYSAAEGLALLQTETDIALAFIDV
VMETDHAGLELVQKIRTELNNHSTRIILRTGQPGQAPEDQVIRDFDINDYKAKTELTAARLKSCVYTSLRSYRDIKIIEQ
SQKGMEKVIAASTSVLKSHTLHNFGSAVLEQTLQLLNLESSALYLTSYHQDLYLDTQMNLLAATGEMISYCEGGSVETLP
GDVREYIIEAIALKTSLVRDNIYVGFYELSGHVTSILYLQHNTKLTDFQVSILELFAANVSLTFENLSGRENVQQTQREL
ILIIGDAIEQRSKETGAHVRRVARMTEMLAIAIGMHADFIETIRYAAPLHDVGKIGIPESILHKPGKLDAEEWAIMQTHA
EKGYNLLAGSNRIIAKMGARIAYTHHERWDGQGYPRGIAKEEIPIEGRLMAIVDVIDALLSKRSYKEAWSVDAVREYILA
QSGKQFDPVLCEASLKLLDAFASLHIHIPDEPL

Sequences:

>Translated_513_residues
MALFKKSADVIEDKSHKPKQGIWKVAIIDDEPGIHEVTRFALKNLTLDNRVLQFYSCYSAAEGLALLQTETDIALAFIDV
VMETDHAGLELVQKIRTELNNHSTRIILRTGQPGQAPEDQVIRDFDINDYKAKTELTAARLKSCVYTSLRSYRDIKIIEQ
SQKGMEKVIAASTSVLKSHTLHNFGSAVLEQTLQLLNLESSALYLTSYHQDLYLDTQMNLLAATGEMISYCEGGSVETLP
GDVREYIIEAIALKTSLVRDNIYVGFYELSGHVTSILYLQHNTKLTDFQVSILELFAANVSLTFENLSGRENVQQTQREL
ILIIGDAIEQRSKETGAHVRRVARMTEMLAIAIGMHADFIETIRYAAPLHDVGKIGIPESILHKPGKLDAEEWAIMQTHA
EKGYNLLAGSNRIIAKMGARIAYTHHERWDGQGYPRGIAKEEIPIEGRLMAIVDVIDALLSKRSYKEAWSVDAVREYILA
QSGKQFDPVLCEASLKLLDAFASLHIHIPDEPL
>Mature_512_residues
ALFKKSADVIEDKSHKPKQGIWKVAIIDDEPGIHEVTRFALKNLTLDNRVLQFYSCYSAAEGLALLQTETDIALAFIDVV
METDHAGLELVQKIRTELNNHSTRIILRTGQPGQAPEDQVIRDFDINDYKAKTELTAARLKSCVYTSLRSYRDIKIIEQS
QKGMEKVIAASTSVLKSHTLHNFGSAVLEQTLQLLNLESSALYLTSYHQDLYLDTQMNLLAATGEMISYCEGGSVETLPG
DVREYIIEAIALKTSLVRDNIYVGFYELSGHVTSILYLQHNTKLTDFQVSILELFAANVSLTFENLSGRENVQQTQRELI
LIIGDAIEQRSKETGAHVRRVARMTEMLAIAIGMHADFIETIRYAAPLHDVGKIGIPESILHKPGKLDAEEWAIMQTHAE
KGYNLLAGSNRIIAKMGARIAYTHHERWDGQGYPRGIAKEEIPIEGRLMAIVDVIDALLSKRSYKEAWSVDAVREYILAQ
SGKQFDPVLCEASLKLLDAFASLHIHIPDEPL

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 57435; Mature: 57303

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFKKSADVIEDKSHKPKQGIWKVAIIDDEPGIHEVTRFALKNLTLDNRVLQFYSCYSA
CCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
AEGLALLQTETDIALAFIDVVMETDHAGLELVQKIRTELNNHSTRIILRTGQPGQAPEDQ
HCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH
VIRDFDINDYKAKTELTAARLKSCVYTSLRSYRDIKIIEQSQKGMEKVIAASTSVLKSHT
HHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHNFGSAVLEQTLQLLNLESSALYLTSYHQDLYLDTQMNLLAATGEMISYCEGGSVETLP
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCC
GDVREYIIEAIALKTSLVRDNIYVGFYELSGHVTSILYLQHNTKLTDFQVSILELFAANV
HHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHCC
SLTFENLSGRENVQQTQRELILIIGDAIEQRSKETGAHVRRVARMTEMLAIAIGMHADFI
EEEEECCCCCHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ETIRYAAPLHDVGKIGIPESILHKPGKLDAEEWAIMQTHAEKGYNLLAGSNRIIAKMGAR
HHHHHHCCHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHCCE
IAYTHHERWDGQGYPRGIAKEEIPIEGRLMAIVDVIDALLSKRSYKEAWSVDAVREYILA
EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QSGKQFDPVLCEASLKLLDAFASLHIHIPDEPL
CCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure 
ALFKKSADVIEDKSHKPKQGIWKVAIIDDEPGIHEVTRFALKNLTLDNRVLQFYSCYSA
CCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
AEGLALLQTETDIALAFIDVVMETDHAGLELVQKIRTELNNHSTRIILRTGQPGQAPEDQ
HCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH
VIRDFDINDYKAKTELTAARLKSCVYTSLRSYRDIKIIEQSQKGMEKVIAASTSVLKSHT
HHEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LHNFGSAVLEQTLQLLNLESSALYLTSYHQDLYLDTQMNLLAATGEMISYCEGGSVETLP
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCC
GDVREYIIEAIALKTSLVRDNIYVGFYELSGHVTSILYLQHNTKLTDFQVSILELFAANV
HHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHCC
SLTFENLSGRENVQQTQRELILIIGDAIEQRSKETGAHVRRVARMTEMLAIAIGMHADFI
EEEEECCCCCHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ETIRYAAPLHDVGKIGIPESILHKPGKLDAEEWAIMQTHAEKGYNLLAGSNRIIAKMGAR
HHHHHHCCHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHCCE
IAYTHHERWDGQGYPRGIAKEEIPIEGRLMAIVDVIDALLSKRSYKEAWSVDAVREYILA
EEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QSGKQFDPVLCEASLKLLDAFASLHIHIPDEPL
CCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]