| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hisB [H]
Identifier: 160875651
GI number: 160875651
Start: 3002657
End: 3003748
Strand: Direct
Name: hisB [H]
Synonym: Sbal195_2539
Alternate gene names: 160875651
Gene position: 3002657-3003748 (Clockwise)
Preceding gene: 160875650
Following gene: 160875652
Centisome position: 56.15
GC content: 50.92
Gene sequence:
>1092_bases ATGAACCCACAATTTATCCCGAACGTTGCACAAAAAATTCTGTTTATCGACCGCGATGGCACCTTGATTGAAGAGCCCGT CACCGACAAACAGGTCGATAGTCTGGCTAAATTAGTGTTCGAGCCACAGGTGATCCCAGCTTTGCTACGTCTGCAAAAGG CAGGATTTCGTTTGGTCATGGTCAGCAATCAAGACGGCCTTGGCACACCGTCTTTCCCGCAGGAAGATTTCGACGCGCCC CACAATATGATGATGCAAATCCTCAAAAGCCAAGGGGTGAACTTCGAAGATGTGGTGATTTGCCCGCACTTTAACGATGA AAATTGCAGCTGCCGTAAACCTAAGCTTGGGCTAGTAAAAGACTATCTCACCCAAGGCTGCATCGATTTCACCCAATCAG CTGTGATTGGCGATCGCGAAACGGATGTGGAACTGGGCAATGCCATGGGCATTAAAAGCCTTAAATATCAACGAGACATG TTGGGCTGGAACGCCATCGCCGATGCGCTGCTCAATAAAGGCCGCACCGCGACGGTCGTGCGCACCACCAAAGAAACGGA CATTCGTGTGACTGTGGATCTCGACAGCCCCGTTAAAGGCAAAATCGACACTGGTATTGGCTTTTTCGACCATATGCTCG ATCAAATTGCCACCCATGGTAATTTTAGAATGGATGTGAAAGTCGATGGCGATTTAGAAATCGACGATCACCACAGCATC GAAGACACGGCGCTAGCCATAGGTGATGCCCTTCGCCAAGCGCTCGGTGACAAACGCGGCATTGCCCGTTTCGGCTTTAG TCTGCCGATGGACGAAGCCAAGGGCGAATGCCTGCTGGATATCTCTGGCCGTCCTTTTATCAAGTTCTCAGCCGATTTTG AACGTGAGCACGTGGGTGAAATGGCCACAGAAATGGTGCCACACTTCTTCCGCTCCTTTGCCGATGGCCTGCGCTGTACG CTGCATGTTTCGACCGAAGGCGATAACGATCATCACAAGGTTGAAGCCCTGTTTAAAGTGCTCGGCCGCGCGCTACGCCA AGCGGTTAAAGTTGAAGGCGATATTCTGCCATCGAGCAAAGGCGTACTTTAA
Upstream 100 bases:
>100_bases TGAACATAAAAACTAATAAAACCAATAAAAAGCGAATGCCGCGCTGAAGGTAACATCAGCTTAAGCATTAGCTAAACGAA TTGAATTTGAAGGTAGAGCC
Downstream 100 bases:
>100_bases GGCATCAGCATAAATCGTTTAAGAGGTTAGGATGCAACAAGACACTCTATTAACAGCTGGCCAGCAATTAACAGCTAGCC CGCAATTAACAGCAAATGAA
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNPQFIPNVAQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPQVIPALLRLQKAGFRLVMVSNQDGLGTPSFPQEDFDAP HNMMMQILKSQGVNFEDVVICPHFNDENCSCRKPKLGLVKDYLTQGCIDFTQSAVIGDRETDVELGNAMGIKSLKYQRDM LGWNAIADALLNKGRTATVVRTTKETDIRVTVDLDSPVKGKIDTGIGFFDHMLDQIATHGNFRMDVKVDGDLEIDDHHSI EDTALAIGDALRQALGDKRGIARFGFSLPMDEAKGECLLDISGRPFIKFSADFEREHVGEMATEMVPHFFRSFADGLRCT LHVSTEGDNDHHKVEALFKVLGRALRQAVKVEGDILPSSKGVL
Sequences:
>Translated_363_residues MNPQFIPNVAQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPQVIPALLRLQKAGFRLVMVSNQDGLGTPSFPQEDFDAP HNMMMQILKSQGVNFEDVVICPHFNDENCSCRKPKLGLVKDYLTQGCIDFTQSAVIGDRETDVELGNAMGIKSLKYQRDM LGWNAIADALLNKGRTATVVRTTKETDIRVTVDLDSPVKGKIDTGIGFFDHMLDQIATHGNFRMDVKVDGDLEIDDHHSI EDTALAIGDALRQALGDKRGIARFGFSLPMDEAKGECLLDISGRPFIKFSADFEREHVGEMATEMVPHFFRSFADGLRCT LHVSTEGDNDHHKVEALFKVLGRALRQAVKVEGDILPSSKGVL >Mature_363_residues MNPQFIPNVAQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPQVIPALLRLQKAGFRLVMVSNQDGLGTPSFPQEDFDAP HNMMMQILKSQGVNFEDVVICPHFNDENCSCRKPKLGLVKDYLTQGCIDFTQSAVIGDRETDVELGNAMGIKSLKYQRDM LGWNAIADALLNKGRTATVVRTTKETDIRVTVDLDSPVKGKIDTGIGFFDHMLDQIATHGNFRMDVKVDGDLEIDDHHSI EDTALAIGDALRQALGDKRGIARFGFSLPMDEAKGECLLDISGRPFIKFSADFEREHVGEMATEMVPHFFRSFADGLRCT LHVSTEGDNDHHKVEALFKVLGRALRQAVKVEGDILPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=355, Percent_Identity=61.4084507042253, Blast_Score=462, Evalue=1e-131, Organism=Escherichia coli, GI1786399, Length=148, Percent_Identity=31.0810810810811, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6324776, Length=165, Percent_Identity=46.0606060606061, Blast_Score=156, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 40271; Mature: 40271
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2 ; PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQFIPNVAQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPQVIPALLRLQKAGFRLVM CCCCCCHHHHHHEEEECCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEE VSNQDGLGTPSFPQEDFDAPHNMMMQILKSQGVNFEDVVICPHFNDENCSCRKPKLGLVK EECCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHH DYLTQGCIDFTQSAVIGDRETDVELGNAMGIKSLKYQRDMLGWNAIADALLNKGRTATVV HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEE RTTKETDIRVTVDLDSPVKGKIDTGIGFFDHMLDQIATHGNFRMDVKVDGDLEIDDHHSI EECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCC EDTALAIGDALRQALGDKRGIARFGFSLPMDEAKGECLLDISGRPFIKFSADFEREHVGE HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHH MATEMVPHFFRSFADGLRCTLHVSTEGDNDHHKVEALFKVLGRALRQAVKVEGDILPSSK HHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GVL CCC >Mature Secondary Structure MNPQFIPNVAQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPQVIPALLRLQKAGFRLVM CCCCCCHHHHHHEEEECCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEE VSNQDGLGTPSFPQEDFDAPHNMMMQILKSQGVNFEDVVICPHFNDENCSCRKPKLGLVK EECCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHH DYLTQGCIDFTQSAVIGDRETDVELGNAMGIKSLKYQRDMLGWNAIADALLNKGRTATVV HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEE RTTKETDIRVTVDLDSPVKGKIDTGIGFFDHMLDQIATHGNFRMDVKVDGDLEIDDHHSI EECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCC EDTALAIGDALRQALGDKRGIARFGFSLPMDEAKGECLLDISGRPFIKFSADFEREHVGE HHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHH MATEMVPHFFRSFADGLRCTLHVSTEGDNDHHKVEALFKVLGRALRQAVKVEGDILPSSK HHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GVL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]