| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hisH [H]
Identifier: 160875652
GI number: 160875652
Start: 3003780
End: 3004607
Strand: Direct
Name: hisH [H]
Synonym: Sbal195_2540
Alternate gene names: 160875652
Gene position: 3003780-3004607 (Clockwise)
Preceding gene: 160875651
Following gene: 160875653
Centisome position: 56.17
GC content: 49.64
Gene sequence:
>828_bases ATGCAACAAGACACTCTATTAACAGCTGGCCAGCAATTAACAGCTAGCCCGCAATTAACAGCAAATGAATCATCAGATGC TGAAACCGTCATCATAGACACGGGCTGCGCCAATTTAAGTTCAGTACGTTTCGCCTTCGAGCGTTTAGGCGCTAAGGTAT TGGTCACAGACGATAAAGCCAAAATCAAAGCGGCAAAACGTGTGGTGCTGCCGGGTGTAGGCACAGCGGGTGCCGCCATG GCGTCCTTACATGAAAAAGGCTTGGTCGAACTCATCCAAAGCCTGACTCAACCTGTGTTGGGCGTATGTCTTGGCATGCA AATGTTGGCGGCAATTTCTAAGGAGCGCGGCGGAAAAGGTCAAGATTGCGAGTGCTTAGGCATAATCCCAACCGACATTT GTGAACTGGATACGCAGTTACTTAAAGCTGAAAGCTTACCTTTGCCACACATGGGTTGGAACCAACTTAAGCTAACAACA AACTCAGAAGGCACCAACAGCCCTAACGTTCACCCACTGTTTGCGGGTATTGAAGATGGCAGCTATGTGTATTTCGTCCA CAGTTACCGCGCGCCGTTGAGCGAATTCACCTTAGCCGAATGTACTTATGGCGAAGGCTTTAGCGCCGCCATCGGCAAAG GCAACTTTATGGGCGTGCAGTTCCACCCCGAAAAAAGTGCCGCCGTGGGCGCGCAAATTCTGCGTAACTTTTTACAGATG GACGAGTCACAGATGAACAAAGCTCTGATGACCGAAGCTCTGATGAACAAAGCGCTGCAAAGCAACTCTGCTGATGGCCA AGCGGGTGTAAATAAGGCTGACCAATGA
Upstream 100 bases:
>100_bases GGCCGCGCGCTACGCCAAGCGGTTAAAGTTGAAGGCGATATTCTGCCATCGAGCAAAGGCGTACTTTAAGGCATCAGCAT AAATCGTTTAAGAGGTTAGG
Downstream 100 bases:
>100_bases ATAAATTACTCATTAAAAAACCAGTTATTAATAAATTACTTATAAACAAATCAATTAAGGATCTGAGCTTATGATTATTC CTGCGATTGATTTAATTGAT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MQQDTLLTAGQQLTASPQLTANESSDAETVIIDTGCANLSSVRFAFERLGAKVLVTDDKAKIKAAKRVVLPGVGTAGAAM ASLHEKGLVELIQSLTQPVLGVCLGMQMLAAISKERGGKGQDCECLGIIPTDICELDTQLLKAESLPLPHMGWNQLKLTT NSEGTNSPNVHPLFAGIEDGSYVYFVHSYRAPLSEFTLAECTYGEGFSAAIGKGNFMGVQFHPEKSAAVGAQILRNFLQM DESQMNKALMTEALMNKALQSNSADGQAGVNKADQ
Sequences:
>Translated_275_residues MQQDTLLTAGQQLTASPQLTANESSDAETVIIDTGCANLSSVRFAFERLGAKVLVTDDKAKIKAAKRVVLPGVGTAGAAM ASLHEKGLVELIQSLTQPVLGVCLGMQMLAAISKERGGKGQDCECLGIIPTDICELDTQLLKAESLPLPHMGWNQLKLTT NSEGTNSPNVHPLFAGIEDGSYVYFVHSYRAPLSEFTLAECTYGEGFSAAIGKGNFMGVQFHPEKSAAVGAQILRNFLQM DESQMNKALMTEALMNKALQSNSADGQAGVNKADQ >Mature_275_residues MQQDTLLTAGQQLTASPQLTANESSDAETVIIDTGCANLSSVRFAFERLGAKVLVTDDKAKIKAAKRVVLPGVGTAGAAM ASLHEKGLVELIQSLTQPVLGVCLGMQMLAAISKERGGKGQDCECLGIIPTDICELDTQLLKAESLPLPHMGWNQLKLTT NSEGTNSPNVHPLFAGIEDGSYVYFVHSYRAPLSEFTLAECTYGEGFSAAIGKGNFMGVQFHPEKSAAVGAQILRNFLQM DESQMNKALMTEALMNKALQSNSADGQAGVNKADQ
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=212, Percent_Identity=48.5849056603774, Blast_Score=201, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6319725, Length=244, Percent_Identity=31.5573770491803, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 29223; Mature: 29223
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQDTLLTAGQQLTASPQLTANESSDAETVIIDTGCANLSSVRFAFERLGAKVLVTDDKA CCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCHH KIKAAKRVVLPGVGTAGAAMASLHEKGLVELIQSLTQPVLGVCLGMQMLAAISKERGGKG HHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QDCECLGIIPTDICELDTQLLKAESLPLPHMGWNQLKLTTNSEGTNSPNVHPLFAGIEDG CCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCC SYVYFVHSYRAPLSEFTLAECTYGEGFSAAIGKGNFMGVQFHPEKSAAVGAQILRNFLQM CEEEEEECCCCCHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHC DESQMNKALMTEALMNKALQSNSADGQAGVNKADQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MQQDTLLTAGQQLTASPQLTANESSDAETVIIDTGCANLSSVRFAFERLGAKVLVTDDKA CCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCHH KIKAAKRVVLPGVGTAGAAMASLHEKGLVELIQSLTQPVLGVCLGMQMLAAISKERGGKG HHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QDCECLGIIPTDICELDTQLLKAESLPLPHMGWNQLKLTTNSEGTNSPNVHPLFAGIEDG CCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCC SYVYFVHSYRAPLSEFTLAECTYGEGFSAAIGKGNFMGVQFHPEKSAAVGAQILRNFLQM CEEEEEECCCCCHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHC DESQMNKALMTEALMNKALQSNSADGQAGVNKADQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]