| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hisD [H]
Identifier: 160875649
GI number: 160875649
Start: 3000033
End: 3001334
Strand: Direct
Name: hisD [H]
Synonym: Sbal195_2537
Alternate gene names: 160875649
Gene position: 3000033-3001334 (Clockwise)
Preceding gene: 160875648
Following gene: 160875650
Centisome position: 56.1
GC content: 52.84
Gene sequence:
>1302_bases ATGGAAATCCTAACTTGGTCAACCTTATCAACCGCCGAGCAGAAAACGGCGCTGAAACGCTCGCCCTTAATCGGTGACAG TGGCTTAGAGCAAAGCGTTCGCGCCATTCTCGATGCGGTGGCGACGCGGGGTGATGCCGCCATTCAAGAATTTAATCAAA AATTTGATGGCTTCAATAGCGCTAAGATTGGTGAACTCCGTATGGGCGAAGCCGAAATAGCTGCGGCAAGCGCACGGGTA TCGCCAGAGCTGAAAGCGGCGATATCCAAAGCCATGGCGAACATAGATGTGTTTCACAGCGCCCAGCAATTTCGCCCGAT TGATATGGAAACCGAGGCGGGAGTACGCTGCGAGCTACGTAGCGAACCGATTGAAAAAGTGGGTTTATATATCCCTGGTG GCAGCGCACCATTAATTTCTACCGTGATGATGCTTGCCCTGCCCGCCAAGATCGCAGGCTGCGAACAAAGAGTATTGGTC AGTCCACCGCCGATCAACGATGCCATTATCTATGCCGCCAATGCCTGCGGGATCACTGAAATCTATCAAGTGGGCGGCGC GCAGGCCATTGCGGCACTGGCCTTTGGCACGGAAACGATTCCGGCAGTTGATAAGATTTTTGGTCCTGGTAACCGCTATG TGACTGAAGCTAAGCGCTTAGTGTCACAGGATGGTCGCTGCACTGTGTGTATCGATATGCCGGCAGGTCCTTCTGAGGTG TTAGTGATTGCCGATAGTGACGCCAATTGCGAATTTATCGCCGCCGATTTGCTTTCACAAGCGGAGCACGGCCCTGATTC ACAAGTGATTTTAGTGACGGATTCGCAAGCTATCGCCGATGGCGTGAATGACGCATTGACGAGACAACTTGCCGTCCTGC CACGTCAAGATATCGCGGCAACGGCGCTACTGAGCAGTCGCACTTTTGTTGTTGACGATATGCTGCAAGCCGCGCAGGTT TCCAATCAATATGGGCCTGAACACTTAATCATTCAAACGCGCTTTCCCCGTGAGGTGCTGAAAAACATTCGCGCCGCTGG CTCAGTATTTTTAGGCGCTTATACGCCGGAATCTGTTGGCGATTATGCCAGTGGCACCAACCACGTGCTGCCGACTTACG GTTACAGCCGCGCCGTGTCGAGCCTGTCATTAGCCGACTTTAGCCGCCGCTTTACCGTGCAGGAACTCAGCGCTAAGGGC TTAATCGGATTGGGGCAAGCGGTCATGACGTTAGCCAGTAACGAATTGCTCGATGCGCACAAAAATGCCGTAGCCATTCG TCTAGCTAGCCTAGAGAAATGA
Upstream 100 bases:
>100_bases CAGTACCGAAGATTTGTTCTGGGATACCATGGAACAGCTGACCGCACTCGGTGCCAGCTCGATTCTGGTCATGCCAATCG AAAAAATGATGGGGTAATGT
Downstream 100 bases:
>100_bases TTCGCCTAGATCTTAAATGATTAGCGCTTAAGTGATTGAAAATATATGTGAGTGAAGAAAATGAGCCAAGTGAGCAGCAT GGAAAAGACAGCAGAACCCG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MEILTWSTLSTAEQKTALKRSPLIGDSGLEQSVRAILDAVATRGDAAIQEFNQKFDGFNSAKIGELRMGEAEIAAASARV SPELKAAISKAMANIDVFHSAQQFRPIDMETEAGVRCELRSEPIEKVGLYIPGGSAPLISTVMMLALPAKIAGCEQRVLV SPPPINDAIIYAANACGITEIYQVGGAQAIAALAFGTETIPAVDKIFGPGNRYVTEAKRLVSQDGRCTVCIDMPAGPSEV LVIADSDANCEFIAADLLSQAEHGPDSQVILVTDSQAIADGVNDALTRQLAVLPRQDIAATALLSSRTFVVDDMLQAAQV SNQYGPEHLIIQTRFPREVLKNIRAAGSVFLGAYTPESVGDYASGTNHVLPTYGYSRAVSSLSLADFSRRFTVQELSAKG LIGLGQAVMTLASNELLDAHKNAVAIRLASLEK
Sequences:
>Translated_433_residues MEILTWSTLSTAEQKTALKRSPLIGDSGLEQSVRAILDAVATRGDAAIQEFNQKFDGFNSAKIGELRMGEAEIAAASARV SPELKAAISKAMANIDVFHSAQQFRPIDMETEAGVRCELRSEPIEKVGLYIPGGSAPLISTVMMLALPAKIAGCEQRVLV SPPPINDAIIYAANACGITEIYQVGGAQAIAALAFGTETIPAVDKIFGPGNRYVTEAKRLVSQDGRCTVCIDMPAGPSEV LVIADSDANCEFIAADLLSQAEHGPDSQVILVTDSQAIADGVNDALTRQLAVLPRQDIAATALLSSRTFVVDDMLQAAQV SNQYGPEHLIIQTRFPREVLKNIRAAGSVFLGAYTPESVGDYASGTNHVLPTYGYSRAVSSLSLADFSRRFTVQELSAKG LIGLGQAVMTLASNELLDAHKNAVAIRLASLEK >Mature_433_residues MEILTWSTLSTAEQKTALKRSPLIGDSGLEQSVRAILDAVATRGDAAIQEFNQKFDGFNSAKIGELRMGEAEIAAASARV SPELKAAISKAMANIDVFHSAQQFRPIDMETEAGVRCELRSEPIEKVGLYIPGGSAPLISTVMMLALPAKIAGCEQRVLV SPPPINDAIIYAANACGITEIYQVGGAQAIAALAFGTETIPAVDKIFGPGNRYVTEAKRLVSQDGRCTVCIDMPAGPSEV LVIADSDANCEFIAADLLSQAEHGPDSQVILVTDSQAIADGVNDALTRQLAVLPRQDIAATALLSSRTFVVDDMLQAAQV SNQYGPEHLIIQTRFPREVLKNIRAAGSVFLGAYTPESVGDYASGTNHVLPTYGYSRAVSSLSLADFSRRFTVQELSAKG LIGLGQAVMTLASNELLDAHKNAVAIRLASLEK
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=433, Percent_Identity=57.0438799076212, Blast_Score=493, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6319819, Length=420, Percent_Identity=45.9523809523809, Blast_Score=360, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45947; Mature: 45947
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILTWSTLSTAEQKTALKRSPLIGDSGLEQSVRAILDAVATRGDAAIQEFNQKFDGFNS CCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC AKIGELRMGEAEIAAASARVSPELKAAISKAMANIDVFHSAQQFRPIDMETEAGVRCELR CCCCCEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC SEPIEKVGLYIPGGSAPLISTVMMLALPAKIAGCEQRVLVSPPPINDAIIYAANACGITE CCCHHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCHHH IYQVGGAQAIAALAFGTETIPAVDKIFGPGNRYVTEAKRLVSQDGRCTVCIDMPAGPSEV HHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCE LVIADSDANCEFIAADLLSQAEHGPDSQVILVTDSQAIADGVNDALTRQLAVLPRQDIAA EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHH TALLSSRTFVVDDMLQAAQVSNQYGPEHLIIQTRFPREVLKNIRAAGSVFLGAYTPESVG HHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCEEEECCCCHHHC DYASGTNHVLPTYGYSRAVSSLSLADFSRRFTVQELSAKGLIGLGQAVMTLASNELLDAH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KNAVAIRLASLEK CCEEEEEEECCCC >Mature Secondary Structure MEILTWSTLSTAEQKTALKRSPLIGDSGLEQSVRAILDAVATRGDAAIQEFNQKFDGFNS CCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC AKIGELRMGEAEIAAASARVSPELKAAISKAMANIDVFHSAQQFRPIDMETEAGVRCELR CCCCCEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEC SEPIEKVGLYIPGGSAPLISTVMMLALPAKIAGCEQRVLVSPPPINDAIIYAANACGITE CCCHHHCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCHHH IYQVGGAQAIAALAFGTETIPAVDKIFGPGNRYVTEAKRLVSQDGRCTVCIDMPAGPSEV HHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCE LVIADSDANCEFIAADLLSQAEHGPDSQVILVTDSQAIADGVNDALTRQLAVLPRQDIAA EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHH TALLSSRTFVVDDMLQAAQVSNQYGPEHLIIQTRFPREVLKNIRAAGSVFLGAYTPESVG HHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCEEEECCCCHHHC DYASGTNHVLPTYGYSRAVSSLSLADFSRRFTVQELSAKGLIGLGQAVMTLASNELLDAH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KNAVAIRLASLEK CCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]