Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is 160875384

Identifier: 160875384

GI number: 160875384

Start: 2695473

End: 2695832

Strand: Direct

Name: 160875384

Synonym: Sbal195_2272

Alternate gene names: NA

Gene position: 2695473-2695832 (Clockwise)

Preceding gene: 160875383

Following gene: 160875385

Centisome position: 50.41

GC content: 45.56

Gene sequence:

>360_bases
ATGGATTTACTACTAATGCGCAACCTCGAACAATTTTTTCGGTTAGTGAATCGCTGGCCTGTGAAGCTTGAGGAACGCAT
TGAATGCCATTGGCCTCCACACGGAGTGTTACTCGAGTGCCATCAAGGACGATTATTGATGACGACTTGGTTGCTTAACA
CTCCCGCACGTGATCTCAAACCTTATTTATCACGTTGGCATCCAGAAGCTTTTGCGGGCAGAGTTCAGCGATTGTTCATC
GTCAAAAACCGTTTAATGATCAGTTGCCTCTGTCCATCGACACACCAGGGGCATGATTGGTATCACTTGTACCAGCTGCA
ACAAAAATTCCTAAATCGTATGCTCATAGGAGGTCAATGA

Upstream 100 bases:

>100_bases
CTGTTGACTTAGTACTTGCGGGTATTCAGGTGTTCACCTGATACCCGCTTTTTATTGTCTGGTAGATGATAAGACCGAGA
GTTAATGCTGGAGAAGCGAT

Downstream 100 bases:

>100_bases
TGAACCTCATTAGTCGTTGGTTAAGTAAAGCCGCAGGGCGTCACGATATCATCTTAAGTGCCATGTTAATGGTAGCTGTA
TTTATGATGATCTTGCCTCT

Product: type III secretion apparatus

Products: NA

Alternate protein names: Type III Secretion Apparatus

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLKPYLSRWHPEAFAGRVQRLFI
VKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ

Sequences:

>Translated_119_residues
MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLKPYLSRWHPEAFAGRVQRLFI
VKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ
>Mature_119_residues
MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLKPYLSRWHPEAFAGRVQRLFI
VKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14375; Mature: 14375

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLK
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCEEEEHHHHCCCHHHHH
PYLSRWHPEAFAGRVQRLFIVKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ
HHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLK
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCEEEEHHHHCCCHHHHH
PYLSRWHPEAFAGRVQRLFIVKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ
HHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA