| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875384
Identifier: 160875384
GI number: 160875384
Start: 2695473
End: 2695832
Strand: Direct
Name: 160875384
Synonym: Sbal195_2272
Alternate gene names: NA
Gene position: 2695473-2695832 (Clockwise)
Preceding gene: 160875383
Following gene: 160875385
Centisome position: 50.41
GC content: 45.56
Gene sequence:
>360_bases ATGGATTTACTACTAATGCGCAACCTCGAACAATTTTTTCGGTTAGTGAATCGCTGGCCTGTGAAGCTTGAGGAACGCAT TGAATGCCATTGGCCTCCACACGGAGTGTTACTCGAGTGCCATCAAGGACGATTATTGATGACGACTTGGTTGCTTAACA CTCCCGCACGTGATCTCAAACCTTATTTATCACGTTGGCATCCAGAAGCTTTTGCGGGCAGAGTTCAGCGATTGTTCATC GTCAAAAACCGTTTAATGATCAGTTGCCTCTGTCCATCGACACACCAGGGGCATGATTGGTATCACTTGTACCAGCTGCA ACAAAAATTCCTAAATCGTATGCTCATAGGAGGTCAATGA
Upstream 100 bases:
>100_bases CTGTTGACTTAGTACTTGCGGGTATTCAGGTGTTCACCTGATACCCGCTTTTTATTGTCTGGTAGATGATAAGACCGAGA GTTAATGCTGGAGAAGCGAT
Downstream 100 bases:
>100_bases TGAACCTCATTAGTCGTTGGTTAAGTAAAGCCGCAGGGCGTCACGATATCATCTTAAGTGCCATGTTAATGGTAGCTGTA TTTATGATGATCTTGCCTCT
Product: type III secretion apparatus
Products: NA
Alternate protein names: Type III Secretion Apparatus
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLKPYLSRWHPEAFAGRVQRLFI VKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ
Sequences:
>Translated_119_residues MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLKPYLSRWHPEAFAGRVQRLFI VKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ >Mature_119_residues MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLKPYLSRWHPEAFAGRVQRLFI VKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14375; Mature: 14375
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLK CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCEEEEHHHHCCCHHHHH PYLSRWHPEAFAGRVQRLFIVKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ HHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLLLMRNLEQFFRLVNRWPVKLEERIECHWPPHGVLLECHQGRLLMTTWLLNTPARDLK CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEECCCCEEEEHHHHCCCHHHHH PYLSRWHPEAFAGRVQRLFIVKNRLMISCLCPSTHQGHDWYHLYQLQQKFLNRMLIGGQ HHHHHCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA