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The map label for this gene is ssaV [H]

Identifier: 160875385

GI number: 160875385

Start: 2695832

End: 2697889

Strand: Direct

Name: ssaV [H]

Synonym: Sbal195_2273

Alternate gene names: 160875385

Gene position: 2695832-2697889 (Clockwise)

Preceding gene: 160875384

Following gene: 160875386

Centisome position: 50.41

GC content: 46.45

Gene sequence:

>2058_bases
ATGAACCTCATTAGTCGTTGGTTAAGTAAAGCCGCAGGGCGTCACGATATCATCTTAAGTGCCATGTTAATGGTAGCTGT
ATTTATGATGATCTTGCCTCTACCGACACCTTTGATCGACGTATTAATTGCCTTAAACCTTGGCTTGTCGATAGTGTTAT
TGATGATCGCCATATACATCCGTGACCCTTTAGAGTTCTCAGTATTTCCATCCCTACTATTGATCACAACCTTATATCGT
CTGGCACTTACTATCAGTACCAGTCGTTTAATTTTGCTGCAGCATGATGCTGGAGATATTGTATACACCTTCGGTAACTT
CGTTGTCGGCGGCAACTTAGCGGTCGGAATTATTATCTTTGCCATCATCACCATAGTGCAGTTTATCGTTATCACTAAGG
GGTCTGAGCGGGTGGCGGAAGTGAGTGCACGTTTTTCCCTCGATGGTATGCCTGGTAAGCAAATGAGTATCGATGGCGAC
ATGCGTGCTGGCATCATTGACGCTAAAGAGGCAAAGCGTCAACGGGCACAAGTTCAGAAAGAAAGTCAGCTTTATGGCGC
GATGGACGGCGCGATGAAGTTTGTAAAAGGCGATGCCATAGCCAGTATTATTGTCATTTTAACTAATATCATTGGTGGTA
TCGCTGTCGGTGTCATGCAGCACAATATGTCGGCTGCAGAAGCATTAAATACTTATGCAGTCTTGTCTGTCGGGGATGGT
TTGATAGCCCAAATACCTTCGTTACTGATTTCAGTCACTGCAGGCTTAATTGTGACCCGAGTTCCTGGAGAGCAGAGACA
GAATTTAGCCAACGAATTAGTGATGCAAGTAGGGCGTCAACCCGCATCATTGCAAATGGCCGGGATAGTCATGTTCATCT
TTGCTTTAATCCCTGGCTTCCCAATTTTAGTCTTCGGCACACTCGGTTCGGTCGTTTTAGGGGCTTCATTGTGGTTGAAG
CGTCAGCAAAAACGAGCAAGTGCTCAAGGAGAGGAGAGCCATTTCACTGACGCTGGCAAAAGTGACACGGCCAATGTCGA
CAATATGGCACCAGGGGCTGTACCACTGATTTTATATCTTGGAGCCGATGTGCCTATCCATGGGGTTAAAGAGGCACTGC
AAAAACTACGTTGGCAATGGTTTGAACAATTGGGCGTGCCATTACCGGAAATCCAATTACAAATAGCGAAGAAAGGCAGC
CTAGGTTGTTGTGATGTGCTCTTGTACCAAGAATCTGTATTGCAATTGCAGCTAGTACCACAGGAAGCCCTTTTGATTGA
CTCCATCGCAACGATTCCATGCCGTGTCGAGTCCATTCCTTTTAGTAATCAAAGATTGCATTGGATCAAAGGTAATGCGC
TTGAACAGGCGGAAGCCCAAGGTTTAGCTGTTTGTCGTGATGAGCAAATTCCCGCTTATGTGATGGGTAAAGTGATCGAC
CGCTATGCAGGGGAGTTTATTGGTGTACAAGAAACTCGGTATTTAATGGATGCTATGGAGGCTCGCTACGGTGAGCTCGT
CAAGGAACTTCAACGACTGTTGTCTGTGGGGAAGGTCGCCGAGATCCTACAACGCTTAGTCGAAGAGGGGATTTCAGTGC
GCGATCTACGGACTATTTTTGAAACCTTAGTCGAATGGGTGCCAAAGGAGAAAGACATCATCATGTTAACTGAGTATGTA
CGGATTGCGCTTCGCCGTCATATTCGTCGCAAGTTTGCTACCCCACAAGGTTGGATCGCTGTGCTCATGGTTGGAGAAGG
AATTGAAAATGTGATCCGTGAATCGATACGACAATCGACTGCTGGCTCTTATTCGGCCTTGGACATGGCACAAACTCAGC
AAATATTAACCTGCATTCAAGAACAGCTGCCACCGGAACAAACCTGTGTACTGTTGACTTCGCTCGATGTGCGCCGTTAC
CTGCGAAAAATCGTAGAACGCGAGTTATTTAGCACACCCGTTTTGTCGTTTCAGGAATTAGGCGACGATGCAGAAATAAA
AGTCATAGGCCAAGTGGACTTAGTGGGTGAGGTACTCGATGCCGCACTGGCGAGCTAA

Upstream 100 bases:

>100_bases
TCAGTTGCCTCTGTCCATCGACACACCAGGGGCATGATTGGTATCACTTGTACCAGCTGCAACAAAAATTCCTAAATCGT
ATGCTCATAGGAGGTCAATG

Downstream 100 bases:

>100_bases
TGGAGGCGATAGATGAAATTACCCAGTAAAGAAACACTTTATGCACAACTCGAACCTAGTTTATTCGCCACTCAGAGTCT
GTTGCCTGTTCCATCGGTTC

Product: secretion system apparatus protein SsaV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYR
LALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD
MRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSVVLGASLWLK
RQQKRASAQGEESHFTDAGKSDTANVDNMAPGAVPLILYLGADVPIHGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGS
LGCCDVLLYQESVLQLQLVPQEALLIDSIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYV
RIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRY
LRKIVERELFSTPVLSFQELGDDAEIKVIGQVDLVGEVLDAALAS

Sequences:

>Translated_685_residues
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYR
LALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD
MRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSVVLGASLWLK
RQQKRASAQGEESHFTDAGKSDTANVDNMAPGAVPLILYLGADVPIHGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGS
LGCCDVLLYQESVLQLQLVPQEALLIDSIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYV
RIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRY
LRKIVERELFSTPVLSFQELGDDAEIKVIGQVDLVGEVLDAALAS
>Mature_685_residues
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYIRDPLEFSVFPSLLLITTLYR
LALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIFAIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGD
MRAGIIDAKEAKRQRAQVQKESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGFPILVFGTLGSVVLGASLWLK
RQQKRASAQGEESHFTDAGKSDTANVDNMAPGAVPLILYLGADVPIHGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGS
LGCCDVLLYQESVLQLQLVPQEALLIDSIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIFETLVEWVPKEKDIIMLTEYV
RIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQSTAGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRY
LRKIVERELFSTPVLSFQELGDDAEIKVIGQVDLVGEVLDAALAS

Specific function: Required For Formation Of The Rod Structure Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=675, Percent_Identity=34.5185185185185, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 75232; Mature: 75232

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYI
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDPLEFSVFPSLLLITTLYRLALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCEEECCHHHHHHHHH
AIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQK
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH
ESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCCC
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGF
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PILVFGTLGSVVLGASLWLKRQQKRASAQGEESHFTDAGKSDTANVDNMAPGAVPLILYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEE
GADVPIHGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGSLGCCDVLLYQESVLQLQLVP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHEEECC
QEALLIDSIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
HHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCHHHHHHCCCEEECCCCCCHHHHHHHHH
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ETLVEWVPKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQST
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC
AGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQEL
CCCCHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
GDDAEIKVIGQVDLVGEVLDAALAS
CCCCCEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLISRWLSKAAGRHDIILSAMLMVAVFMMILPLPTPLIDVLIALNLGLSIVLLMIAIYI
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDPLEFSVFPSLLLITTLYRLALTISTSRLILLQHDAGDIVYTFGNFVVGGNLAVGIIIF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCEEECCHHHHHHHHH
AIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGIIDAKEAKRQRAQVQK
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH
ESQLYGAMDGAMKFVKGDAIASIIVILTNIIGGIAVGVMQHNMSAAEALNTYAVLSVGDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCCC
LIAQIPSLLISVTAGLIVTRVPGEQRQNLANELVMQVGRQPASLQMAGIVMFIFALIPGF
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PILVFGTLGSVVLGASLWLKRQQKRASAQGEESHFTDAGKSDTANVDNMAPGAVPLILYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEE
GADVPIHGVKEALQKLRWQWFEQLGVPLPEIQLQIAKKGSLGCCDVLLYQESVLQLQLVP
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHEEECC
QEALLIDSIATIPCRVESIPFSNQRLHWIKGNALEQAEAQGLAVCRDEQIPAYVMGKVID
HHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCHHHHHHCCCEEECCCCCCHHHHHHHHH
RYAGEFIGVQETRYLMDAMEARYGELVKELQRLLSVGKVAEILQRLVEEGISVRDLRTIF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ETLVEWVPKEKDIIMLTEYVRIALRRHIRRKFATPQGWIAVLMVGEGIENVIRESIRQST
HHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC
AGSYSALDMAQTQQILTCIQEQLPPEQTCVLLTSLDVRRYLRKIVERELFSTPVLSFQEL
CCCCHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
GDDAEIKVIGQVDLVGEVLDAALAS
CCCCCEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]