| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is motB [H]
Identifier: 160874504
GI number: 160874504
Start: 1659258
End: 1660190
Strand: Direct
Name: motB [H]
Synonym: Sbal195_1386
Alternate gene names: 160874504
Gene position: 1659258-1660190 (Clockwise)
Preceding gene: 160874503
Following gene: 160874505
Centisome position: 31.03
GC content: 49.09
Gene sequence:
>933_bases ATGGCTAAGGCTAAGTGCAACTGTCCACCGGCCGGAGCACCGATGTGGTTGGCGACCTTTGCTGACTTGATGTCGCTGTT GATGTGTTTCTTCGTGTTGTTATTGTCATTTTCCGAAATGGACGTAATGAAGTTTAAGCAGATCGCGGGCTCAATGAAGT ATGCCTTTGGTGTGCAAAATAAGGTGGAAGTCAAAGATATCCCGAAAGGGACGTCTGTTATTGCCTTAGAATTTAGACCA GGACGTCCCGATCCCACGCCGATTGAAATTATCAACCAGCAAACCAATGAAATGACGGAACCTGTATTGGATTACCAAGC GGGTGAAGACGACAGTGCTGGCGGCGTTCAGCAGCAAAGTGGTTCTCAGCGTGGTGGTGAAGCCACTGCAACGGCGCAGG AAGTGGCCGATGCGGTTAAAGCCGAAGCGGCAGCGGCGCAGGATAAGATCAATCAAGAAGTGAAGAAGATGGCGCAGGAG CTCAATAAAGAGATCACCGATGGTGCGATTGAAATTGAGTCCTTAGGTCAGCAGATTATTATCCGTATCCGTGAGAAGGG CGCATTTGCCTCTGGTTCGGGCTTCCTTCAACCACGATTTAAGCCTGTGGTGCGCTCTGTTGGCGAACTGCTAAAAGATG TGCCGGGGATTATTACGGTATCGGGTTACACGGATGACATGCAAATCAGCGATGAGCTTTATAGCTCTAACTGGGATTTA TCCAGTAAACGCGCTGTGGCTGTGGCTCACGAGTTGGTGCAAGTCAAAGGCTTTGATTCTAAACGGATGAAAGTGGTTGG CATGGCGTCTAACAATCCGATAGTGCCAAATGATTCACCGGAGAATCGTGCCCGTAACCGCAGGGTGGAAATTGCCATTG AGCAAGGTAAAGCGAAGGAATCTGATGAAATTCAGGTTGGTAATTCGCCTTAG
Upstream 100 bases:
>100_bases GATTCAAGACGGACAAAACCCACGGGTGATTGAAGGCTTCTTGAAAAATTATCTGGCTGAGAAAAATCGCAAAATAGATA CAACGGACGGAGAGTAGCCC
Downstream 100 bases:
>100_bases GTATCTAGGTACTCACTGAATCTAAAGCCGCAATCCTGTTGCGGCTTTTTTATTGGGCTAAGGTAGACGTTTCCCTTTTT TGCTAACGCGTTATGCACCA
Product: flagellar motor protein MotB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MAKAKCNCPPAGAPMWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIALEFRP GRPDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQSGSQRGGEATATAQEVADAVKAEAAAAQDKINQEVKKMAQE LNKEITDGAIEIESLGQQIIIRIREKGAFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDL SSKRAVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKESDEIQVGNSP
Sequences:
>Translated_310_residues MAKAKCNCPPAGAPMWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIALEFRP GRPDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQSGSQRGGEATATAQEVADAVKAEAAAAQDKINQEVKKMAQE LNKEITDGAIEIESLGQQIIIRIREKGAFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDL SSKRAVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKESDEIQVGNSP >Mature_309_residues AKAKCNCPPAGAPMWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIALEFRPG RPDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQSGSQRGGEATATAQEVADAVKAEAAAAQDKINQEVKKMAQEL NKEITDGAIEIESLGQQIIIRIREKGAFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDLS SKRAVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKESDEIQVGNSP
Specific function: May be involved in some transport function [H]
COG id: COG1360
COG function: function code N; Flagellar motor protein
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 OmpA-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788198, Length=124, Percent_Identity=34.6774193548387, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI48994946, Length=136, Percent_Identity=31.6176470588235, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006665 [H]
Pfam domain/function: PF00691 OmpA [H]
EC number: NA
Molecular weight: Translated: 33683; Mature: 33552
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAKCNCPPAGAPMWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC KVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQS CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHC GSQRGGEATATAQEVADAVKAEAAAAQDKINQEVKKMAQELNKEITDGAIEIESLGQQII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IRIREKGAFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDL HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCC SSKRAVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKE CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCEEEEEEECCCCCC SDEIQVGNSP CCCEECCCCC >Mature Secondary Structure AKAKCNCPPAGAPMWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC KVEVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQS CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHC GSQRGGEATATAQEVADAVKAEAAAAQDKINQEVKKMAQELNKEITDGAIEIESLGQQII CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IRIREKGAFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDL HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCC SSKRAVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKE CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCEEEEEEECCCCCC SDEIQVGNSP CCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934817; 9387221; 9384377 [H]