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The map label for this gene is pomA [H]

Identifier: 160874503

GI number: 160874503

Start: 1658487

End: 1659254

Strand: Direct

Name: pomA [H]

Synonym: Sbal195_1385

Alternate gene names: 160874503

Gene position: 1658487-1659254 (Clockwise)

Preceding gene: 160874497

Following gene: 160874504

Centisome position: 31.02

GC content: 46.61

Gene sequence:

>768_bases
GTGGATTTAGCAACAGTAATTGGAATTGTGGGTGCCTTTGGTTTTATCCTCGGGGCAATGGCCACCAGCGGCGGTTTAAT
GATTTTCGTTGATGTACCCTCGATTCTTATTGTTTTCGGTGGGTCCTTCTTCGTGGTGATGATGAAGTTCAATCTTAAAC
AGTTTTTTAGTGCGGTAAAAATCGCCGCCAAAGCGTTTATTTTTAAGATTGATAAGCCAGAAGATTTGATTGAACAGTCC
GTGACTATGGCTGATGCCGCCCGTAAAGGCGGTTTTTTAGCTTTAGAAGAAGCGCAAATTACCAACAGCTTTATGCAAAA
AGCCGTCGACATGCTTGTTGATGGTCACGATGGTGAAGTGGTGCGCGCTGCCTTAGAGAAGGATATCGCCCTGACCGAAG
AGCGCCATCGTACAGGGATCGGCATTTTTAGAGCGTTTGGTGACGTAGGTCCGGCAATGGGCATGATTGGTACGCTGGTG
GGTCTTGTGGCCATGCTGTCAAACATGTCAGATCCTAAATCCATCGGCCCCTCGATGGCGGTGGCCTTGTTAACCACCTT
ATACGGCGCTATGGTTGCTAACATGGTTTGTCTTCCTATCGCGGATAAGTTAACGCTTAGGATGGGTGAAGAAATGCTGA
ACCGTAACTTGATTATGGATGCGGTATTGGCGATTCAAGACGGACAAAACCCACGGGTGATTGAAGGCTTCTTGAAAAAT
TATCTGGCTGAGAAAAATCGCAAAATAGATACAACGGACGGAGAGTAG

Upstream 100 bases:

>100_bases
TGTATGTCGGTGGGATTATCTTACTCAGTGGAACAACTGAGTGTTATTGCTTACTTAGGGTAAGTATTATGTCGTTTATT
ACGAAAATTGAGGAGCCGTT

Downstream 100 bases:

>100_bases
CCCATGGCTAAGGCTAAGTGCAACTGTCCACCGGCCGGAGCACCGATGTGGTTGGCGACCTTTGCTGACTTGATGTCGCT
GTTGATGTGTTTCTTCGTGT

Product: flagellar motor protein PomA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDLATVIGIVGAFGFILGAMATSGGLMIFVDVPSILIVFGGSFFVVMMKFNLKQFFSAVKIAAKAFIFKIDKPEDLIEQS
VTMADAARKGGFLALEEAQITNSFMQKAVDMLVDGHDGEVVRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGTLV
GLVAMLSNMSDPKSIGPSMAVALLTTLYGAMVANMVCLPIADKLTLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKN
YLAEKNRKIDTTDGE

Sequences:

>Translated_255_residues
MDLATVIGIVGAFGFILGAMATSGGLMIFVDVPSILIVFGGSFFVVMMKFNLKQFFSAVKIAAKAFIFKIDKPEDLIEQS
VTMADAARKGGFLALEEAQITNSFMQKAVDMLVDGHDGEVVRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGTLV
GLVAMLSNMSDPKSIGPSMAVALLTTLYGAMVANMVCLPIADKLTLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKN
YLAEKNRKIDTTDGE
>Mature_255_residues
MDLATVIGIVGAFGFILGAMATSGGLMIFVDVPSILIVFGGSFFVVMMKFNLKQFFSAVKIAAKAFIFKIDKPEDLIEQS
VTMADAARKGGFLALEEAQITNSFMQKAVDMLVDGHDGEVVRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGTLV
GLVAMLSNMSDPKSIGPSMAVALLTTLYGAMVANMVCLPIADKLTLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKN
YLAEKNRKIDTTDGE

Specific function: PomA and PomB comprise the stator element of the flagellar motor complex. Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi- pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 27422; Mature: 27422

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLATVIGIVGAFGFILGAMATSGGLMIFVDVPSILIVFGGSFFVVMMKFNLKQFFSAVK
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IAAKAFIFKIDKPEDLIEQSVTMADAARKGGFLALEEAQITNSFMQKAVDMLVDGHDGEV
HHHHHHHEECCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHH
VRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGTLVGLVAMLSNMSDPKSIGPSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHCCHHHH
VALLTTLYGAMVANMVCLPIADKLTLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YLAEKNRKIDTTDGE
HHHHCCCCCCCCCCC
>Mature Secondary Structure
MDLATVIGIVGAFGFILGAMATSGGLMIFVDVPSILIVFGGSFFVVMMKFNLKQFFSAVK
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IAAKAFIFKIDKPEDLIEQSVTMADAARKGGFLALEEAQITNSFMQKAVDMLVDGHDGEV
HHHHHHHEECCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHH
VRAALEKDIALTEERHRTGIGIFRAFGDVGPAMGMIGTLVGLVAMLSNMSDPKSIGPSMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHCCHHHH
VALLTTLYGAMVANMVCLPIADKLTLRMGEEMLNRNLIMDAVLAIQDGQNPRVIEGFLKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YLAEKNRKIDTTDGE
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9260952 [H]