| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cobP [H]
Identifier: 160874133
GI number: 160874133
Start: 1208256
End: 1208876
Strand: Direct
Name: cobP [H]
Synonym: Sbal195_1013
Alternate gene names: 160874133
Gene position: 1208256-1208876 (Clockwise)
Preceding gene: 160874132
Following gene: 160874134
Centisome position: 22.6
GC content: 53.46
Gene sequence:
>621_bases GTGATCCACCTCGTCCTAGGCGGCGCCCGTAGCGGTAAGAGTCGCTACGGCGAAGCCTTAGTGCGCCAGTACACTGCGCT CGGCTTCGATGCCTGCTATGTGGCCACGGCGCTGGCGCTGGATGATGAAATGGCGACCCGTATCGCCAAACATCAAGCGG GACGAACGGACGATGGTATCGAATGGCAATTGTTTGAAGAATCGCTCGCCCTTACGGCACTGTTAAAGCGCTTAGCAAAA CCTGGGCGAGTGATTTTAGTGGACTGTTTAACCCTTTGGTTAACCAATCAATTACTCGCATCCAGCGCCAAGATTGAGGA TGAACCGGCGCCGACTGAGTGGCATGCGACTGACTTTATAACCTCTGCCAGTTCAACCTCTAACGATGAAGCTTTGGCGA GTTGGCAGGCGGAGAAAAGCGCTTTTGTGGATTCACTTGCCGAGCTCGAAGGTGTGGTGGTGTTGATCAGTAACGAAGTT GGCTCAGGTATCGTGCCCTTAGGTGAGTTGAGCCGACAATTTGTCGATGAAGCGGGCTGGTTAAACCAAGCCGTAGCCGC CTTGGCTGACAATGTCACCTTAGTGGTTGCGGGTTTACCCTTGGCACTCAAACCACTTTAA
Upstream 100 bases:
>100_bases GACGCCAGATTGGCGGTTACACGGGTGATACCTTAGGCGCGGCGCAGCAAATAGCTGAAATCGTGTGTTATTTTGTATTG CTCGTTGTAGGTAACATACT
Downstream 100 bases:
>100_bases TCTAACTAAGTTAAGTGATGTTGAGACTGAGCTTTTATCTTTATCCCTGCAAACTAGAATAAGTTTTTAACCCTATGCCC TCTCCAAACACAGACAACAC
Product: cobalbumin biosynthesis protein
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MIHLVLGGARSGKSRYGEALVRQYTALGFDACYVATALALDDEMATRIAKHQAGRTDDGIEWQLFEESLALTALLKRLAK PGRVILVDCLTLWLTNQLLASSAKIEDEPAPTEWHATDFITSASSTSNDEALASWQAEKSAFVDSLAELEGVVVLISNEV GSGIVPLGELSRQFVDEAGWLNQAVAALADNVTLVVAGLPLALKPL
Sequences:
>Translated_206_residues MIHLVLGGARSGKSRYGEALVRQYTALGFDACYVATALALDDEMATRIAKHQAGRTDDGIEWQLFEESLALTALLKRLAK PGRVILVDCLTLWLTNQLLASSAKIEDEPAPTEWHATDFITSASSTSNDEALASWQAEKSAFVDSLAELEGVVVLISNEV GSGIVPLGELSRQFVDEAGWLNQAVAALADNVTLVVAGLPLALKPL >Mature_206_residues MIHLVLGGARSGKSRYGEALVRQYTALGFDACYVATALALDDEMATRIAKHQAGRTDDGIEWQLFEESLALTALLKRLAK PGRVILVDCLTLWLTNQLLASSAKIEDEPAPTEWHATDFITSASSTSNDEALASWQAEKSAFVDSLAELEGVVVLISNEV GSGIVPLGELSRQFVDEAGWLNQAVAALADNVTLVVAGLPLALKPL
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=204, Percent_Identity=36.7647058823529, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 22019; Mature: 22019
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHLVLGGARSGKSRYGEALVRQYTALGFDACYVATALALDDEMATRIAKHQAGRTDDGI CEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EWQLFEESLALTALLKRLAKPGRVILVDCLTLWLTNQLLASSAKIEDEPAPTEWHATDFI CHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH TSASSTSNDEALASWQAEKSAFVDSLAELEGVVVLISNEVGSGIVPLGELSRQFVDEAGW HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH LNQAVAALADNVTLVVAGLPLALKPL HHHHHHHHHCCCEEEEECCCEEECCC >Mature Secondary Structure MIHLVLGGARSGKSRYGEALVRQYTALGFDACYVATALALDDEMATRIAKHQAGRTDDGI CEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EWQLFEESLALTALLKRLAKPGRVILVDCLTLWLTNQLLASSAKIEDEPAPTEWHATDFI CHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH TSASSTSNDEALASWQAEKSAFVDSLAELEGVVVLISNEVGSGIVPLGELSRQFVDEAGW HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH LNQAVAALADNVTLVVAGLPLALKPL HHHHHHHHHCCCEEEEECCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]