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The map label for this gene is rsmC [H]

Identifier: 160873960

GI number: 160873960

Start: 983391

End: 984434

Strand: Reverse

Name: rsmC [H]

Synonym: Sbal195_0838

Alternate gene names: 160873960

Gene position: 984434-983391 (Counterclockwise)

Preceding gene: 160873961

Following gene: 160873959

Centisome position: 18.41

GC content: 50.19

Gene sequence:

>1044_bases
GTGTTAACCAATCCATCGCAAGTCATTATTCGTAATCAAGACAGCCTAAGCCAACATAAAGTGTTAGTGCTCAATCATGA
AGCCGATCTACTGCCAAAAGCCCTGCTCGATGTCGCGGCATCGGTCGATGCACTCGCCTTGGATTACCACCATTACTTGC
ACTTAGCGCCGCACGCCAACTCAAAGCTGCGTTGCTATTTCGGCCATGACCTGCCGCACCAAGACCCGCTTGAACGAGAA
AAGTACGATACGGTTATTGTTTATTTCCCCAAAGCCAAACCCTTAGCACCTTATTTGTTTAACCTCGCCGCCAATCATCT
TGTGCCTAACGGCCAACTGTTAGTCGTTGGAGAAAACAAAGGCGGGATTAAGTCTTTAGTGAAGCTGTTACCTGAGTATT
TTGCGACTGGGATGAAGCTCGATAACGCTCGCCACTGCCTGTTATTTGGCAGCAGCTTAGAAGGCAGCGCGCCGGCGATG
AAGCTCAGTGACTGGGTCAGTCAGTATCAACTCTCGACGCCGCAGGGCGAGATCAGTATCTGCAATTTAGTTGGGGTGTT
TAGCGAAAAACGCTTAGATCTGGGCACTGAATTGTTACTGTCGCACCTACCGACACTCTCGGGCCGAGTGCTCGATTTTG
GTTGCGGCGCCGGCGTGATTGCCGCTGCCCTGCTCAAGGCCCAGCCGAGCTTATCCTTAGAGTGTGTCGATATTAATGCG
ATGGCCTTGGCTTCCTGCGAACTCACCTTAGCCGCCAATGGCATGACGGCCAAAGTCTATCCTTCCGATGGACTCGCGCA
AACTACAGGGAAATTTAACGGCATTATCTCCAATCCGCCGTTCCACGATGGCCTTGCAAGCACCACCAGCATAGCGCAGA
ACTTTGTCACTGATAGTGCCAAGCAATTACAACATAACGGCATTTGGCAAATTGTCGCCAACCGCCACTTGCCCTATTCC
GATATCATTGCCGCCGAATTTGGCCAATTAAAAGTGGTTGCCGATAACAACAAGTACAAGTTGTATTACTTCCAGCACAA
GTAA

Upstream 100 bases:

>100_bases
GGGATTTTATTAAGTCTTAGCGCAGGGATTAGATGCAAACTGGCTCAGGCGTGAATAACGGGTATAATGCCCACACTTAA
GTTTATAGGTGCCTGTAACT

Downstream 100 bases:

>100_bases
AACCGCTATCGAGAACGCGCTTATGCTTCAGCTATAGGCGCGTTATTAACTACGCCTCATACTCACTCGTATCACTATCC
CTGTTTTTTTCCAGATAAAG

Product: rRNA (guanine-N(2)-)-methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MLTNPSQVIIRNQDSLSQHKVLVLNHEADLLPKALLDVAASVDALALDYHHYLHLAPHANSKLRCYFGHDLPHQDPLERE
KYDTVIVYFPKAKPLAPYLFNLAANHLVPNGQLLVVGENKGGIKSLVKLLPEYFATGMKLDNARHCLLFGSSLEGSAPAM
KLSDWVSQYQLSTPQGEISICNLVGVFSEKRLDLGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPSLSLECVDINA
MALASCELTLAANGMTAKVYPSDGLAQTTGKFNGIISNPPFHDGLASTTSIAQNFVTDSAKQLQHNGIWQIVANRHLPYS
DIIAAEFGQLKVVADNNKYKLYYFQHK

Sequences:

>Translated_347_residues
MLTNPSQVIIRNQDSLSQHKVLVLNHEADLLPKALLDVAASVDALALDYHHYLHLAPHANSKLRCYFGHDLPHQDPLERE
KYDTVIVYFPKAKPLAPYLFNLAANHLVPNGQLLVVGENKGGIKSLVKLLPEYFATGMKLDNARHCLLFGSSLEGSAPAM
KLSDWVSQYQLSTPQGEISICNLVGVFSEKRLDLGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPSLSLECVDINA
MALASCELTLAANGMTAKVYPSDGLAQTTGKFNGIISNPPFHDGLASTTSIAQNFVTDSAKQLQHNGIWQIVANRHLPYS
DIIAAEFGQLKVVADNNKYKLYYFQHK
>Mature_347_residues
MLTNPSQVIIRNQDSLSQHKVLVLNHEADLLPKALLDVAASVDALALDYHHYLHLAPHANSKLRCYFGHDLPHQDPLERE
KYDTVIVYFPKAKPLAPYLFNLAANHLVPNGQLLVVGENKGGIKSLVKLLPEYFATGMKLDNARHCLLFGSSLEGSAPAM
KLSDWVSQYQLSTPQGEISICNLVGVFSEKRLDLGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPSLSLECVDINA
MALASCELTLAANGMTAKVYPSDGLAQTTGKFNGIISNPPFHDGLASTTSIAQNFVTDSAKQLQHNGIWQIVANRHLPYS
DIIAAEFGQLKVVADNNKYKLYYFQHK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=344, Percent_Identity=36.6279069767442, Blast_Score=197, Evalue=7e-52,
Organism=Escherichia coli, GI87082206, Length=169, Percent_Identity=35.5029585798817, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37851; Mature: 37851

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNPSQVIIRNQDSLSQHKVLVLNHEADLLPKALLDVAASVDALALDYHHYLHLAPHAN
CCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCHHHEEEEEEHEEEECCCCC
SKLRCYFGHDLPHQDPLEREKYDTVIVYFPKAKPLAPYLFNLAANHLVPNGQLLVVGENK
CEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
GGIKSLVKLLPEYFATGMKLDNARHCLLFGSSLEGSAPAMKLSDWVSQYQLSTPQGEISI
CCHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEE
CNLVGVFSEKRLDLGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPSLSLECVDINA
EEEEHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCE
MALASCELTLAANGMTAKVYPSDGLAQTTGKFNGIISNPPFHDGLASTTSIAQNFVTDSA
EEEEEEEEEEEECCEEEEEECCCCCHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
KQLQHNGIWQIVANRHLPYSDIIAAEFGQLKVVADNNKYKLYYFQHK
HHHHHCCEEEEEECCCCCHHHHHHHCCCCEEEEEECCEEEEEEEECC
>Mature Secondary Structure
MLTNPSQVIIRNQDSLSQHKVLVLNHEADLLPKALLDVAASVDALALDYHHYLHLAPHAN
CCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCHHHEEEEEEHEEEECCCCC
SKLRCYFGHDLPHQDPLEREKYDTVIVYFPKAKPLAPYLFNLAANHLVPNGQLLVVGENK
CEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
GGIKSLVKLLPEYFATGMKLDNARHCLLFGSSLEGSAPAMKLSDWVSQYQLSTPQGEISI
CCHHHHHHHHHHHHHCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEE
CNLVGVFSEKRLDLGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPSLSLECVDINA
EEEEHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCE
MALASCELTLAANGMTAKVYPSDGLAQTTGKFNGIISNPPFHDGLASTTSIAQNFVTDSA
EEEEEEEEEEEECCEEEEEECCCCCHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH
KQLQHNGIWQIVANRHLPYSDIIAAEFGQLKVVADNNKYKLYYFQHK
HHHHHCCEEEEEECCCCCHHHHHHHCCCCEEEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA