| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is phoB [H]
Identifier: 160873961
GI number: 160873961
Start: 984619
End: 985938
Strand: Reverse
Name: phoB [H]
Synonym: Sbal195_0839
Alternate gene names: 160873961
Gene position: 985938-984619 (Counterclockwise)
Preceding gene: 160873962
Following gene: 160873960
Centisome position: 18.44
GC content: 50.0
Gene sequence:
>1320_bases ATGAGTTTCACCAAAGCGCCACTCTTGTTACTCGGCATCAGTTTGCTGTTATCTACGCCAGTTTGGGCAGATGAAACGGG TCCAACGAAAGCGCCATCGCGACCGAAAAATATCGTCATCATGATAGGTGATGGTATGGGGCCGTCTTACACTAGCGCCT ACCGCTACTACAAAGATAATCCTGACACTGAAGAAGTCGAGCAAACCGTATTCGACCGTTTACTGGTGGGCATGGCAAGC ACCTACCCCGCGAGCGTCAGTGGTTATGTGACTGATTCAGCCGCGGCCGCGACAGCGCTAGCCACAGGGGTTAAATCTTA TAATGGGGCGATTTCGGTCGATACCCAAAAACAACCGCTGCCGACCATACTCGAAAAAGCCAAATCCCTTGGCCTCAGCA CAGGTGTCGCGGTAACATCGCAAATCAACCACGCTACGCCAGCGGCCTTTTTGGCCCACAACGAAAGCCGTAAAAATTAC GACGCTCTGGCACTCAGCTATTTAGAAACCAACGCCGATGTATTTTTAGGCGGTGGTCAAAAGTATTTCCCCCCAGCGCT GTTAGAGCAGTTCAAAGCCAAGGGCTATCAGCACATCAGCCGTTTTGAGGATCTCGCCAGCATCACCCAACCAAAAGTGT TGGGCCTGTTTGCCGAAGTACAATTGCCTTGGGCGATTGATGAGAAAGATGCAAGAAAACTCAGCACCTTAACTCAAAAG GCACTCAGCTTACTGTCGCAAAATGACCAAGGTTTTGTGCTGTTAGTCGAAGGGAGTCTCATCGACTGGGCGGGCCACAA TAACGATATCGCCACTGCCATGAGTGAGATGGATGAATTCTCCAATGCCATTGAAGTGGTTGAGCAATTTGTGCGTGAAC ATCCCGATACCCTGATGGTGATCACCGCCGACCACAATACCGGTGGCCTATCGATTGGCGTCGATGGTAACTACAACTGG AACCCTGAAATCCTGCGTAATATCTCGGCCAGCACAGACACTTTGGCCTTGGCCACCATCACTGGTGAACAATGGCAAGC CGATCTCGCCCGCGGTTTAGGCTTTGAGCTTAGCGAAGAAGAAGTCGCTAAATTGAACGTCGCCAGAATGCAGGGATTAG AAACCATGGCGGTGGCGATTCGCCATCTTATTGATAAACGTACTGATACAGGTTGGACAACCGACGGCCACACAGGCACA GACGTACAAGTATTTGCCGCAGGTCCGGCATCTGAGCTGTTTAACGGCCATCAAGATAATACCGATATCGCCAATAAGAT TTTTAGCTTATTACCTAAACCGAAGAAACCTAAAAGCTAA
Upstream 100 bases:
>100_bases AAGCACGCATTAACACCAAAGCATAAGAATTTACCAACGAGTTTGTTGATTGTAAGGCGCGAGCAAATCGCGAGCGCCGA ACCACTTCTAGGGATGTGAT
Downstream 100 bases:
>100_bases GCGTTAATCGATTCCGTTCATTAAAGGCAATCACATAAGGCAACCGCATAATGCAGTTGCCTTTTTTATTGGGTCTTTTT ATTAGGGATTTTATTAAGTC
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase III; APase III [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSFTKAPLLLLGISLLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDNPDTEEVEQTVFDRLLVGMAS TYPASVSGYVTDSAAAATALATGVKSYNGAISVDTQKQPLPTILEKAKSLGLSTGVAVTSQINHATPAAFLAHNESRKNY DALALSYLETNADVFLGGGQKYFPPALLEQFKAKGYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQK ALSLLSQNDQGFVLLVEGSLIDWAGHNNDIATAMSEMDEFSNAIEVVEQFVREHPDTLMVITADHNTGGLSIGVDGNYNW NPEILRNISASTDTLALATITGEQWQADLARGLGFELSEEEVAKLNVARMQGLETMAVAIRHLIDKRTDTGWTTDGHTGT DVQVFAAGPASELFNGHQDNTDIANKIFSLLPKPKKPKS
Sequences:
>Translated_439_residues MSFTKAPLLLLGISLLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDNPDTEEVEQTVFDRLLVGMAS TYPASVSGYVTDSAAAATALATGVKSYNGAISVDTQKQPLPTILEKAKSLGLSTGVAVTSQINHATPAAFLAHNESRKNY DALALSYLETNADVFLGGGQKYFPPALLEQFKAKGYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQK ALSLLSQNDQGFVLLVEGSLIDWAGHNNDIATAMSEMDEFSNAIEVVEQFVREHPDTLMVITADHNTGGLSIGVDGNYNW NPEILRNISASTDTLALATITGEQWQADLARGLGFELSEEEVAKLNVARMQGLETMAVAIRHLIDKRTDTGWTTDGHTGT DVQVFAAGPASELFNGHQDNTDIANKIFSLLPKPKKPKS >Mature_438_residues SFTKAPLLLLGISLLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDNPDTEEVEQTVFDRLLVGMAST YPASVSGYVTDSAAAATALATGVKSYNGAISVDTQKQPLPTILEKAKSLGLSTGVAVTSQINHATPAAFLAHNESRKNYD ALALSYLETNADVFLGGGQKYFPPALLEQFKAKGYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQKA LSLLSQNDQGFVLLVEGSLIDWAGHNNDIATAMSEMDEFSNAIEVVEQFVREHPDTLMVITADHNTGGLSIGVDGNYNWN PEILRNISASTDTLALATITGEQWQADLARGLGFELSEEEVAKLNVARMQGLETMAVAIRHLIDKRTDTGWTTDGHTGTD VQVFAAGPASELFNGHQDNTDIANKIFSLLPKPKKPKS
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=454, Percent_Identity=29.9559471365639, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI94721246, Length=452, Percent_Identity=28.7610619469027, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI116734717, Length=456, Percent_Identity=28.0701754385965, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI294660770, Length=452, Percent_Identity=27.8761061946903, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI157266292, Length=452, Percent_Identity=28.0973451327434, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI48994877, Length=328, Percent_Identity=35.3658536585366, Blast_Score=160, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320689, Length=458, Percent_Identity=30.3493449781659, Blast_Score=164, Evalue=2e-41, Organism=Drosophila melanogaster, GI21355981, Length=442, Percent_Identity=27.8280542986425, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24651554, Length=463, Percent_Identity=30.0215982721382, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI19921912, Length=460, Percent_Identity=26.9565217391304, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI85725200, Length=444, Percent_Identity=26.5765765765766, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI85815833, Length=444, Percent_Identity=26.5765765765766, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24657842, Length=449, Percent_Identity=27.3942093541203, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI18859923, Length=293, Percent_Identity=28.6689419795222, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI21358067, Length=449, Percent_Identity=27.3942093541203, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI21355151, Length=448, Percent_Identity=25.2232142857143, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24657835, Length=448, Percent_Identity=27.0089285714286, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24585213, Length=478, Percent_Identity=26.1506276150628, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24657827, Length=445, Percent_Identity=26.2921348314607, Blast_Score=95, Evalue=1e-19,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 47480; Mature: 47349
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTKAPLLLLGISLLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDN CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHEECCC PDTEEVEQTVFDRLLVGMASTYPASVSGYVTDSAAAATALATGVKSYNGAISVDTQKQPL CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEEEECCCCCCH PTILEKAKSLGLSTGVAVTSQINHATPAAFLAHNESRKNYDALALSYLETNADVFLGGGQ HHHHHHHHHCCCCCCEEHECCCCCCCCHHHEECCCCCCCHHHHHHHHEECCCCEEECCCC KYFPPALLEQFKAKGYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCEEECHHHHHHHHHHHHH ALSLLSQNDQGFVLLVEGSLIDWAGHNNDIATAMSEMDEFSNAIEVVEQFVREHPDTLMV HHHHHCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ITADHNTGGLSIGVDGNYNWNPEILRNISASTDTLALATITGEQWQADLARGLGFELSEE EEECCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHH EVAKLNVARMQGLETMAVAIRHLIDKRTDTGWTTDGHTGTDVQVFAAGPASELFNGHQDN HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCC TDIANKIFSLLPKPKKPKS HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SFTKAPLLLLGISLLLSTPVWADETGPTKAPSRPKNIVIMIGDGMGPSYTSAYRYYKDN CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHEECCC PDTEEVEQTVFDRLLVGMASTYPASVSGYVTDSAAAATALATGVKSYNGAISVDTQKQPL CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHCCCEEEECCCCCCH PTILEKAKSLGLSTGVAVTSQINHATPAAFLAHNESRKNYDALALSYLETNADVFLGGGQ HHHHHHHHHCCCCCCEEHECCCCCCCCHHHEECCCCCCCHHHHHHHHEECCCCEEECCCC KYFPPALLEQFKAKGYQHISRFEDLASITQPKVLGLFAEVQLPWAIDEKDARKLSTLTQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCEEECHHHHHHHHHHHHH ALSLLSQNDQGFVLLVEGSLIDWAGHNNDIATAMSEMDEFSNAIEVVEQFVREHPDTLMV HHHHHCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ITADHNTGGLSIGVDGNYNWNPEILRNISASTDTLALATITGEQWQADLARGLGFELSEE EEECCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCHH EVAKLNVARMQGLETMAVAIRHLIDKRTDTGWTTDGHTGTDVQVFAAGPASELFNGHQDN HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCC TDIANKIFSLLPKPKKPKS HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1898729; 9202461; 9384377; 2113910; 2105301 [H]