| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873959
Identifier: 160873959
GI number: 160873959
Start: 981219
End: 982907
Strand: Reverse
Name: 160873959
Synonym: Sbal195_0837
Alternate gene names: NA
Gene position: 982907-981219 (Counterclockwise)
Preceding gene: 160873960
Following gene: 160873958
Centisome position: 18.38
GC content: 49.38
Gene sequence:
>1689_bases ATGCTGGACCCTGAACTCATTGAGCTAAACAGCGATAAGACAAAAGCTGAATTGCGCCTGATCCCTAATGTCCATGGCCC AGTCACCCATGAAGATATAATGCGCCTGTTGTCTTTACCTGAATTCGCCTCCCTGTTTCCGTTAGAGCCTGCCATTACTA AAACCGTCGCTAAAATCAACTCTCTGTGCAGTCAAGACGACGGGAAATTTGAGCTCTACGCCACTTTGGCTGAACGCCGC GATGGCACCATAGCAATCGAAATTAGCCCAGATAAAATGCAAGCCAGCCTAAAACTGACCGCAGCATGGGGCGGTAAACA GATAGATTTGCCAGAGATCCTTACCCATCTCAAAAAGAACAACGTCTGCATGGGGTTGAGCAAACTCAAAATTCAAGCGC TACTGAAACAACTCGGTACCCTCAAGGCGGGCGAAGTCTGCCAAAGTGACATCGCCCAAGGTAAAGCCCCTGTCAATGGA CTCAATGCGGTATTAGAACGCAAAGTGTTCCTCGCACGCGAACGCTTACTCCAGCCACAAGAGCGGGAAGATGGCAGTGT CGATATGCGTAATCTCGGCTCGCTTATCGTCGTCAAAGCCAATGATCTCTTAATGGTTAAGCACCCCGCCACCGAAGGCA CGCCGGGTTACAACATCAAGGGCGAAGTGCTTAAACAAAAACCGGGTAAAGATGCCGTGCTTCAAGCAGGTACAGGTACA GATTTTCATCCCAAAGATCCCAATAAACTCATCGCCACAGTGCCAGGGCAACCCGTCGAAACCCGTACTGGTATGAATGT TGATGATATTTTGCAGCTTAAAGATGTCGACATCGGCACAGGTCATATCAGCTTTAAGGGCAGTATTTTAATCACCGGCG ATGTCCACGAGGGCATGGTAGTTAAAAGCTCGGGCGATATTACCGTGATGGGCTTTGTGGACTCCGCTACCCTAGAGGCG GAGGGTGATGTCACAGTAAGTAAAGGCATCATTGGCAGACAAATCAAAGCCAATGAATACTCTACTAATATCCATTCTCA AGGGCAGATCAGCGCCCAGTTTGTGCAATATTCCAATTTGGTAGCCAAGGGCAATATCTTAGTCACTAAACAGTTGCTGC ACAGCCATACCAAAACCGCCGGCAGTTTAACGGTCAGCGATCCGAGTGGTCGTCGTGGCGATCTGGTGGGCGGTGTCGCG CGTGCTGAGAAAGGCATCACGGCGGTTGTCATAGGGGCAACGGCGGGAACCAAAACCGACGTTTATTGCGCGATGGAACA TGCCGAACTCAAGCAAGATCTCAAGCTGCTCGATGAAAGCGTTAAAGCTATGGTCGTCGCCAGTTTAGATATCGAGGCTC GCCTCAATAAGCTGCCGCCTAAATCAGAATGGCAAGGCGACGCGGCGATGATCGAGCAAATCAAGATGATGCTCGATGAG AAGAATCGCATTATGGATGAACGCACCCGCGAAGAACTCGAGTTCGATACCTTCAAACAAGAGGTCGAAGGCTATTACGA GAAATACCGTATCGAAGTGCTTAAACACGTATTCCTTAACGTTGAGTTACATATAGGTCCAGCGAATCATCGCACCGCCC GTGAACACGGCACTTGCTGCATTGCCAATGTCAGTCAAGAGATTAACTTTGACTATAACGCCAAAGCCAAAGCCGCACCG ACCGTATAA
Upstream 100 bases:
>100_bases GTTTTTGCAGCCAAAAAGGCTTCTTTACCCTAAGTTTCTACTGTTATACTCAAATCAGCTTCTTAAACAATAATAAAACG CAATTACTAGGAATGCCCCT
Downstream 100 bases:
>100_bases TCTTGGCTAGGAGTGATGACTCAGTCGTCACGCCTTCCTCATTCAGCCAGACTCAGTGAACTTGTTCTGGCCTCTATCAA TCTTCCCTCAGCGTGGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MLDPELIELNSDKTKAELRLIPNVHGPVTHEDIMRLLSLPEFASLFPLEPAITKTVAKINSLCSQDDGKFELYATLAERR DGTIAIEISPDKMQASLKLTAAWGGKQIDLPEILTHLKKNNVCMGLSKLKIQALLKQLGTLKAGEVCQSDIAQGKAPVNG LNAVLERKVFLARERLLQPQEREDGSVDMRNLGSLIVVKANDLLMVKHPATEGTPGYNIKGEVLKQKPGKDAVLQAGTGT DFHPKDPNKLIATVPGQPVETRTGMNVDDILQLKDVDIGTGHISFKGSILITGDVHEGMVVKSSGDITVMGFVDSATLEA EGDVTVSKGIIGRQIKANEYSTNIHSQGQISAQFVQYSNLVAKGNILVTKQLLHSHTKTAGSLTVSDPSGRRGDLVGGVA RAEKGITAVVIGATAGTKTDVYCAMEHAELKQDLKLLDESVKAMVVASLDIEARLNKLPPKSEWQGDAAMIEQIKMMLDE KNRIMDERTREELEFDTFKQEVEGYYEKYRIEVLKHVFLNVELHIGPANHRTAREHGTCCIANVSQEINFDYNAKAKAAP TV
Sequences:
>Translated_562_residues MLDPELIELNSDKTKAELRLIPNVHGPVTHEDIMRLLSLPEFASLFPLEPAITKTVAKINSLCSQDDGKFELYATLAERR DGTIAIEISPDKMQASLKLTAAWGGKQIDLPEILTHLKKNNVCMGLSKLKIQALLKQLGTLKAGEVCQSDIAQGKAPVNG LNAVLERKVFLARERLLQPQEREDGSVDMRNLGSLIVVKANDLLMVKHPATEGTPGYNIKGEVLKQKPGKDAVLQAGTGT DFHPKDPNKLIATVPGQPVETRTGMNVDDILQLKDVDIGTGHISFKGSILITGDVHEGMVVKSSGDITVMGFVDSATLEA EGDVTVSKGIIGRQIKANEYSTNIHSQGQISAQFVQYSNLVAKGNILVTKQLLHSHTKTAGSLTVSDPSGRRGDLVGGVA RAEKGITAVVIGATAGTKTDVYCAMEHAELKQDLKLLDESVKAMVVASLDIEARLNKLPPKSEWQGDAAMIEQIKMMLDE KNRIMDERTREELEFDTFKQEVEGYYEKYRIEVLKHVFLNVELHIGPANHRTAREHGTCCIANVSQEINFDYNAKAKAAP TV >Mature_562_residues MLDPELIELNSDKTKAELRLIPNVHGPVTHEDIMRLLSLPEFASLFPLEPAITKTVAKINSLCSQDDGKFELYATLAERR DGTIAIEISPDKMQASLKLTAAWGGKQIDLPEILTHLKKNNVCMGLSKLKIQALLKQLGTLKAGEVCQSDIAQGKAPVNG LNAVLERKVFLARERLLQPQEREDGSVDMRNLGSLIVVKANDLLMVKHPATEGTPGYNIKGEVLKQKPGKDAVLQAGTGT DFHPKDPNKLIATVPGQPVETRTGMNVDDILQLKDVDIGTGHISFKGSILITGDVHEGMVVKSSGDITVMGFVDSATLEA EGDVTVSKGIIGRQIKANEYSTNIHSQGQISAQFVQYSNLVAKGNILVTKQLLHSHTKTAGSLTVSDPSGRRGDLVGGVA RAEKGITAVVIGATAGTKTDVYCAMEHAELKQDLKLLDESVKAMVVASLDIEARLNKLPPKSEWQGDAAMIEQIKMMLDE KNRIMDERTREELEFDTFKQEVEGYYEKYRIEVLKHVFLNVELHIGPANHRTAREHGTCCIANVSQEINFDYNAKAKAAP TV
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61345; Mature: 61345
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPELIELNSDKTKAELRLIPNVHGPVTHEDIMRLLSLPEFASLFPLEPAITKTVAKIN CCCCCEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHH SLCSQDDGKFELYATLAERRDGTIAIEISPDKMQASLKLTAAWGGKQIDLPEILTHLKKN HHHCCCCCCEEEEEEEHHCCCCEEEEEECHHHEEEEEEEEEECCCCCCCHHHHHHHHCCC NVCMGLSKLKIQALLKQLGTLKAGEVCQSDIAQGKAPVNGLNAVLERKVFLARERLLQPQ CEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC EREDGSVDMRNLGSLIVVKANDLLMVKHPATEGTPGYNIKGEVLKQKPGKDAVLQAGTGT CCCCCCCCHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCC DFHPKDPNKLIATVPGQPVETRTGMNVDDILQLKDVDIGTGHISFKGSILITGDVHEGMV CCCCCCCCCEEEECCCCCCCCCCCCCHHHHHEEEECCCCCCEEEEECCEEEEECCCCCEE VKSSGDITVMGFVDSATLEAEGDVTVSKGIIGRQIKANEYSTNIHSQGQISAQFVQYSNL EECCCCEEEEEEECCCEEECCCCEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCE VAKGNILVTKQLLHSHTKTAGSLTVSDPSGRRGDLVGGVARAEKGITAVVIGATAGTKTD EECCCEEEEHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCC VYCAMEHAELKQDLKLLDESVKAMVVASLDIEARLNKLPPKSEWQGDAAMIEQIKMMLDE EEEEHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH KNRIMDERTREELEFDTFKQEVEGYYEKYRIEVLKHVFLNVELHIGPANHRTAREHGTCC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHCCCEE IANVSQEINFDYNAKAKAAPTV EEECHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLDPELIELNSDKTKAELRLIPNVHGPVTHEDIMRLLSLPEFASLFPLEPAITKTVAKIN CCCCCEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHH SLCSQDDGKFELYATLAERRDGTIAIEISPDKMQASLKLTAAWGGKQIDLPEILTHLKKN HHHCCCCCCEEEEEEEHHCCCCEEEEEECHHHEEEEEEEEEECCCCCCCHHHHHHHHCCC NVCMGLSKLKIQALLKQLGTLKAGEVCQSDIAQGKAPVNGLNAVLERKVFLARERLLQPQ CEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC EREDGSVDMRNLGSLIVVKANDLLMVKHPATEGTPGYNIKGEVLKQKPGKDAVLQAGTGT CCCCCCCCHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCC DFHPKDPNKLIATVPGQPVETRTGMNVDDILQLKDVDIGTGHISFKGSILITGDVHEGMV CCCCCCCCCEEEECCCCCCCCCCCCCHHHHHEEEECCCCCCEEEEECCEEEEECCCCCEE VKSSGDITVMGFVDSATLEAEGDVTVSKGIIGRQIKANEYSTNIHSQGQISAQFVQYSNL EECCCCEEEEEEECCCEEECCCCEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCE VAKGNILVTKQLLHSHTKTAGSLTVSDPSGRRGDLVGGVARAEKGITAVVIGATAGTKTD EECCCEEEEHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCC VYCAMEHAELKQDLKLLDESVKAMVVASLDIEARLNKLPPKSEWQGDAAMIEQIKMMLDE EEEEHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH KNRIMDERTREELEFDTFKQEVEGYYEKYRIEVLKHVFLNVELHIGPANHRTAREHGTCC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHCCCEE IANVSQEINFDYNAKAKAAPTV EEECHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA