| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is dut [H]
Identifier: 160873511
GI number: 160873511
Start: 439585
End: 440043
Strand: Reverse
Name: dut [H]
Synonym: Sbal195_0386
Alternate gene names: 160873511
Gene position: 440043-439585 (Counterclockwise)
Preceding gene: 160873512
Following gene: 160873510
Centisome position: 8.23
GC content: 48.8
Gene sequence:
>459_bases ATGAAAACACCGATTGAATTAAAAATTCTCGACTCCCGTATCGGCTCAGAATTTCCTTTACCTGCCTACGCTACACCTGG CAGTGCAGGCATGGATCTTCGCGCCATGATCGACACGACTTTGACTATAGCACCGGGTGAAACCGTGCTTATTCCAACGG GGATTGCCATTCATGTTGCCGATCCAGGACTGGCTGCAGTGATTTTGCCGCGCTCAGGTCTTGGCCATAAACACGGTATC GTACTGGGGAATCTGGTCGGACTCATAGATTCAGATTACCAAGGACCCTTAATGGTGTCTTGCTGGAATCGTAGCGACAG TCCTTTTGCCTTAGAAATTGGCGATCGTCTCGCACAACTGGTGTTTGTTCCTGTAGTACAAGCACAATTCAAACTCGTTG ATGAGTTCGACAGCTCAGATCGTGGCGAAGGCGGATTTGGCCATTCAGGCACTAAATAA
Upstream 100 bases:
>100_bases GAGTGTTCTGGCCGCACGGCAGTCAAGATTTGCCTGCCACTGACAAACTCACGCTGGCACGGCAATTACTTTCGTTGATA GTGAAAGAAAAAACAAATAC
Downstream 100 bases:
>100_bases TCCCCTAAGTCGTTATTGAGCCAAGGATACTGCAATGGCTGTAAGCCCAAAAATTAATCGTCGTGAACATATTTTGCAAT GTCTAGCACAGATGCTAGAA
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKTPIELKILDSRIGSEFPLPAYATPGSAGMDLRAMIDTTLTIAPGETVLIPTGIAIHVADPGLAAVILPRSGLGHKHGI VLGNLVGLIDSDYQGPLMVSCWNRSDSPFALEIGDRLAQLVFVPVVQAQFKLVDEFDSSDRGEGGFGHSGTK
Sequences:
>Translated_152_residues MKTPIELKILDSRIGSEFPLPAYATPGSAGMDLRAMIDTTLTIAPGETVLIPTGIAIHVADPGLAAVILPRSGLGHKHGI VLGNLVGLIDSDYQGPLMVSCWNRSDSPFALEIGDRLAQLVFVPVVQAQFKLVDEFDSSDRGEGGFGHSGTK >Mature_152_residues MKTPIELKILDSRIGSEFPLPAYATPGSAGMDLRAMIDTTLTIAPGETVLIPTGIAIHVADPGLAAVILPRSGLGHKHGI VLGNLVGLIDSDYQGPLMVSCWNRSDSPFALEIGDRLAQLVFVPVVQAQFKLVDEFDSSDRGEGGFGHSGTK
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=144, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=3e-15, Organism=Homo sapiens, GI4503423, Length=144, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI70906441, Length=146, Percent_Identity=32.8767123287671, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1790071, Length=148, Percent_Identity=68.2432432432432, Blast_Score=224, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71988561, Length=130, Percent_Identity=36.1538461538462, Blast_Score=79, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6319729, Length=133, Percent_Identity=39.0977443609023, Blast_Score=77, Evalue=9e-16, Organism=Drosophila melanogaster, GI24583610, Length=132, Percent_Identity=35.6060606060606, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI19921126, Length=132, Percent_Identity=35.6060606060606, Blast_Score=79, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16037; Mature: 16037
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPIELKILDSRIGSEFPLPAYATPGSAGMDLRAMIDTTLTIAPGETVLIPTGIAIHVA CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCEEEEECCEEEEEE DPGLAAVILPRSGLGHKHGIVLGNLVGLIDSDYQGPLMVSCWNRSDSPFALEIGDRLAQL CCCEEEEEEECCCCCCCCCEEEEHEEEECCCCCCCCEEEEEECCCCCCEEEEHHHHHHHH VFVPVVQAQFKLVDEFDSSDRGEGGFGHSGTK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTPIELKILDSRIGSEFPLPAYATPGSAGMDLRAMIDTTLTIAPGETVLIPTGIAIHVA CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEECCCCEEEEECCEEEEEE DPGLAAVILPRSGLGHKHGIVLGNLVGLIDSDYQGPLMVSCWNRSDSPFALEIGDRLAQL CCCEEEEEEECCCCCCCCCEEEEHEEEECCCCCCCCEEEEEECCCCCCEEEEHHHHHHHH VFVPVVQAQFKLVDEFDSSDRGEGGFGHSGTK HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA