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The map label for this gene is yicC [H]

Identifier: 160873505

GI number: 160873505

Start: 432752

End: 433615

Strand: Reverse

Name: yicC [H]

Synonym: Sbal195_0380

Alternate gene names: 160873505

Gene position: 433615-432752 (Counterclockwise)

Preceding gene: 160873508

Following gene: 160873501

Centisome position: 8.11

GC content: 53.12

Gene sequence:

>864_bases
ATGATCCAAAGCATGACAGCCTACGCTCGCATCGAGCACAAAGCACAATGGGGCACTGCCTCCTGGGAAATTCGCTCAGT
CAATCAACGTTATCTCGAAACTTACCTACGTTTACCCGAGCAATTCCGCAGTTTCGAACCCGTACTGCGCGACCGCCTAC
GTAAACGCTTAAGCCGCGGTAAAGTCGAAGTCAATCTGCGCTACGAACTGGCAGACAACAGCAACAACGAGCTGCAATTG
AATCAAGCGCTGGCCAAACAGCTATTAGGCGCTGCCAATTGGCTCAAGCAAGAAGCGGGACAAGGCGATGTCAATCTTAC
CGACATCCTGCGCTGGCCGGGCGTGCTAGCAAGCGGTGAACAAGATATGGATGCCATCGGCGCCGATCTGATGACAGCCT
TCGACTCAGCCATAGATCAATTCATCGAAGCCCGCGGCCGTGAAGGCGAAGCCATCAAAGACATGCTGCTAAGCCGCTTA
GACGGAGTCAGCGAGCAAATCGCCGTCGTACGCGAGCACATGCCTACTGTGATGCTGTATCAACGCGAAAAGCTCACCAA
CCGCCTTGCAGAAATCAAAGGTGAACTCGACCCAGCCCGCATCGAGCAAGAAATGGTGCTACTGGCACAGAAACAAGATG
TAGCCGAAGAAATGGATCGCCTCGAAGCCCATGTGGCCGAAGCTCGCCGCATCCTCAAAAAAGGCGGCAGCGAAGGTCGC
CGTTTAGACTTTATGATGCAGGAATTTAACCGCGAATCGAACACGCTCGCCTCTAAATCCATCAGCACTGAGATCACCTC
GGCCGCAGTGGAACTTAAAGTTCTCATCGAGCAAATGCGCGAGCAGATCCAAAACGTTGAGTAA

Upstream 100 bases:

>100_bases
CTTCAGGCAGCTTGGGTATATTTGCTGTATGCCTTTAATCCTAAAGCCATTGACTCTATAATCGCCTCTCATTATGACGA
TTAAACCATTAGGACAACCC

Downstream 100 bases:

>100_bases
TGATAGTTAACGCGTTTTAGATACCAAAAAGCCCTTAATGTAAGGGCTTTTTGTATTTTATGGCGCAGGAAAAAAACCTT
TACAAGCTTGCTTGCGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRKRLSRGKVEVNLRYELADNSNNELQL
NQALAKQLLGAANWLKQEAGQGDVNLTDILRWPGVLASGEQDMDAIGADLMTAFDSAIDQFIEARGREGEAIKDMLLSRL
DGVSEQIAVVREHMPTVMLYQREKLTNRLAEIKGELDPARIEQEMVLLAQKQDVAEEMDRLEAHVAEARRILKKGGSEGR
RLDFMMQEFNRESNTLASKSISTEITSAAVELKVLIEQMREQIQNVE

Sequences:

>Translated_287_residues
MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRKRLSRGKVEVNLRYELADNSNNELQL
NQALAKQLLGAANWLKQEAGQGDVNLTDILRWPGVLASGEQDMDAIGADLMTAFDSAIDQFIEARGREGEAIKDMLLSRL
DGVSEQIAVVREHMPTVMLYQREKLTNRLAEIKGELDPARIEQEMVLLAQKQDVAEEMDRLEAHVAEARRILKKGGSEGR
RLDFMMQEFNRESNTLASKSISTEITSAAVELKVLIEQMREQIQNVE
>Mature_287_residues
MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRKRLSRGKVEVNLRYELADNSNNELQL
NQALAKQLLGAANWLKQEAGQGDVNLTDILRWPGVLASGEQDMDAIGADLMTAFDSAIDQFIEARGREGEAIKDMLLSRL
DGVSEQIAVVREHMPTVMLYQREKLTNRLAEIKGELDPARIEQEMVLLAQKQDVAEEMDRLEAHVAEARRILKKGGSEGR
RLDFMMQEFNRESNTLASKSISTEITSAAVELKVLIEQMREQIQNVE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=62.0209059233449, Blast_Score=358, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 32832; Mature: 32832

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRKRLSRG
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KVEVNLRYELADNSNNELQLNQALAKQLLGAANWLKQEAGQGDVNLTDILRWPGVLASGE
CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC
QDMDAIGADLMTAFDSAIDQFIEARGREGEAIKDMLLSRLDGVSEQIAVVREHMPTVMLY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
QREKLTNRLAEIKGELDPARIEQEMVLLAQKQDVAEEMDRLEAHVAEARRILKKGGSEGR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RLDFMMQEFNRESNTLASKSISTEITSAAVELKVLIEQMREQIQNVE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRKRLSRG
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KVEVNLRYELADNSNNELQLNQALAKQLLGAANWLKQEAGQGDVNLTDILRWPGVLASGE
CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC
QDMDAIGADLMTAFDSAIDQFIEARGREGEAIKDMLLSRLDGVSEQIAVVREHMPTVMLY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
QREKLTNRLAEIKGELDPARIEQEMVLLAQKQDVAEEMDRLEAHVAEARRILKKGGSEGR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RLDFMMQEFNRESNTLASKSISTEITSAAVELKVLIEQMREQIQNVE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]