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The map label for this gene is 160873501

Identifier: 160873501

GI number: 160873501

Start: 429894

End: 430532

Strand: Reverse

Name: 160873501

Synonym: Sbal195_0376

Alternate gene names: NA

Gene position: 430532-429894 (Counterclockwise)

Preceding gene: 160873505

Following gene: 160873499

Centisome position: 8.05

GC content: 44.6

Gene sequence:

>639_bases
TTGGCAGCGGCTAAAATCCCTCTCTTTTATGACGATAGAGAACATGCAGAAAAAATCATCTATGAGCTGTCACTGCACGA
AGATCTCTCACTCATCAAAAAACACCTAAAATTGGGTGATTATCAACTCAATGGTTGGCTGATTGAACGTAAAACGTTGC
CCGATCTCGTGCAATCATTATGCGATGGGCGCCTATTCTCACAGGTGGCCAGATTAGCCCAGAGCCCAAATCATACCGCC
CTGCTTATCGAAGGTTATACACAAGATATCGCATGTTACCAGATACGCAGAGAAGCGTTAATCGGGGCGCTGTGCTCGAT
TTCAATCAATTTCCACATCCCAATACTGCGCAGTCTATCGCAAACTGAAACAGCCAAAATTCTGTATTTTTGCGCCACTC
AGTTAAACCGTAGAGAACATGAATTAACCCTCACGGGACGTAAGCCCAAACGCAAGAAAAATCAGCAATTATTCATCTTG
CAAAGCCTACCCGAGGTAGGCCCTAAACTCGCCAATAAACTTTTATGCCATTTCGCCAGTGTCGAGGCAGTCGTAACAGC
ATCTGAAGAGGCATTGATGCAAGTGGGTGGTATAGGTAAAAATAAAGCAAGTAAGATCCGTGAAGTGCTGACTCGCTAA

Upstream 100 bases:

>100_bases
AGGCGACTCAGAAAGCTGAAGACAACTTTTGTGCTTGTTGTTCAGCCTGACTACACTCATAAACAATCCTGAATATGTCA
CTCGGTTGAGGTCACTAAAA

Downstream 100 bases:

>100_bases
GTGACTTCACAGCATAAGCTGAGTGCCTGTTGACTTACCCGAACAATAAACTATATAGCTCTTGGTGCGAGCTCACTTGA
TAGTGCGGGGCGATACCGGC

Product: ERCC4 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MAAAKIPLFYDDREHAEKIIYELSLHEDLSLIKKHLKLGDYQLNGWLIERKTLPDLVQSLCDGRLFSQVARLAQSPNHTA
LLIEGYTQDIACYQIRREALIGALCSISINFHIPILRSLSQTETAKILYFCATQLNRREHELTLTGRKPKRKKNQQLFIL
QSLPEVGPKLANKLLCHFASVEAVVTASEEALMQVGGIGKNKASKIREVLTR

Sequences:

>Translated_212_residues
MAAAKIPLFYDDREHAEKIIYELSLHEDLSLIKKHLKLGDYQLNGWLIERKTLPDLVQSLCDGRLFSQVARLAQSPNHTA
LLIEGYTQDIACYQIRREALIGALCSISINFHIPILRSLSQTETAKILYFCATQLNRREHELTLTGRKPKRKKNQQLFIL
QSLPEVGPKLANKLLCHFASVEAVVTASEEALMQVGGIGKNKASKIREVLTR
>Mature_211_residues
AAAKIPLFYDDREHAEKIIYELSLHEDLSLIKKHLKLGDYQLNGWLIERKTLPDLVQSLCDGRLFSQVARLAQSPNHTAL
LIEGYTQDIACYQIRREALIGALCSISINFHIPILRSLSQTETAKILYFCATQLNRREHELTLTGRKPKRKKNQQLFILQ
SLPEVGPKLANKLLCHFASVEAVVTASEEALMQVGGIGKNKASKIREVLTR

Specific function: Unknown

COG id: COG1948

COG function: function code L; ERCC4-type nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR020819
- InterPro:   IPR006166
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR011335
- InterPro:   IPR010994 [H]

Pfam domain/function: PF00270 DEAD; PF02732 ERCC4; PF00271 Helicase_C; PF00633 HHH [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 23975; Mature: 23844

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAKIPLFYDDREHAEKIIYELSLHEDLSLIKKHLKLGDYQLNGWLIERKTLPDLVQSL
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCHHHHHHHH
CDGRLFSQVARLAQSPNHTALLIEGYTQDIACYQIRREALIGALCSISINFHIPILRSLS
HCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHCC
QTETAKILYFCATQLNRREHELTLTGRKPKRKKNQQLFILQSLPEVGPKLANKLLCHFAS
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEHHCHHCCHHHHHHHHHHHHH
VEAVVTASEEALMQVGGIGKNKASKIREVLTR
HHHHEECCHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AAAKIPLFYDDREHAEKIIYELSLHEDLSLIKKHLKLGDYQLNGWLIERKTLPDLVQSL
CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCHHHHHHHH
CDGRLFSQVARLAQSPNHTALLIEGYTQDIACYQIRREALIGALCSISINFHIPILRSLS
HCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHCC
QTETAKILYFCATQLNRREHELTLTGRKPKRKKNQQLFILQSLPEVGPKLANKLLCHFAS
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEHHCHHCCHHHHHHHHHHHHH
VEAVVTASEEALMQVGGIGKNKASKIREVLTR
HHHHEECCHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]