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The map label for this gene is ubiC [H]

Identifier: 160873256

GI number: 160873256

Start: 153487

End: 154062

Strand: Reverse

Name: ubiC [H]

Synonym: Sbal195_0130

Alternate gene names: 160873256

Gene position: 154062-153487 (Counterclockwise)

Preceding gene: 160873259

Following gene: 160873253

Centisome position: 2.88

GC content: 49.13

Gene sequence:

>576_bases
ATGAATGTGACTAGCTTAAGCTTCCCCTATGGTGAATCTATTCAGTGGTTTTGTGCCGAAAGCGCCAACAAACTCCCCAA
ATCGCCCTTGAAAGAATGGTTACTTGCCACTGGCAGCCTAACTCAAAAACTCAAAACTTGCTGCACTCAATTTGAAGTAA
AAGTCCTTGGCGAAGGACTGCATGCGCCCTTAGATGGCGAGTATCCCCAGCAAGGCTCAGTATGGATCCGCGAAGTGTTA
CTTTGCCTCGACTCAATCCCTTGGGTGTTTGCCAGAACCTTGATCCCCGAAAAGTTAATGGCCGAGCGCCAAGCGGATTT
TTTAGGTCTGGGCACCCGCCCCTTAGGTGAACTGCTGTTTAGCCAAGATCATTTTATCCCAGGCAGAATTGAAGTGGCCA
GTTTTGAGACCTGTAGTCGCCTCGCGCATTTAGCCGAAAGTTTAGATCAGAGTGTCGAACATGAACTCTGGGGACGCCGC
CGCTATTTTCATCACGGTGAACACGAAATGATCGTCAGTGAAATCTTTCTGCCTGCGGCCGAGCAAGCTATCCGTAAGCT
TGAATCCGAGCTTTAG

Upstream 100 bases:

>100_bases
CTAAAAACAATAATGGTAATGGAAGAAACTTCCCAATCTATCTGCTCGCGTCGCGACATGCTAGACTGCCGACGTTTGCC
TATATTGTAACGAGTATTTA

Downstream 100 bases:

>100_bases
CCAAAGCTTGCTTTAATGACTGATGACAAATAAAAATGCCTCTAAATTAGAGGCATTTTTGCTCTGCTATCACGCGATTA
ACTTAGCGAATATTTAACTG

Product: chorismate lyase

Products: NA

Alternate protein names: CL; CPL [H]

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNVTSLSFPYGESIQWFCAESANKLPKSPLKEWLLATGSLTQKLKTCCTQFEVKVLGEGLHAPLDGEYPQQGSVWIREVL
LCLDSIPWVFARTLIPEKLMAERQADFLGLGTRPLGELLFSQDHFIPGRIEVASFETCSRLAHLAESLDQSVEHELWGRR
RYFHHGEHEMIVSEIFLPAAEQAIRKLESEL

Sequences:

>Translated_191_residues
MNVTSLSFPYGESIQWFCAESANKLPKSPLKEWLLATGSLTQKLKTCCTQFEVKVLGEGLHAPLDGEYPQQGSVWIREVL
LCLDSIPWVFARTLIPEKLMAERQADFLGLGTRPLGELLFSQDHFIPGRIEVASFETCSRLAHLAESLDQSVEHELWGRR
RYFHHGEHEMIVSEIFLPAAEQAIRKLESEL
>Mature_191_residues
MNVTSLSFPYGESIQWFCAESANKLPKSPLKEWLLATGSLTQKLKTCCTQFEVKVLGEGLHAPLDGEYPQQGSVWIREVL
LCLDSIPWVFARTLIPEKLMAERQADFLGLGTRPLGELLFSQDHFIPGRIEVASFETCSRLAHLAESLDQSVEHELWGRR
RYFHHGEHEMIVSEIFLPAAEQAIRKLESEL

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway [H]

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family [H]

Homologues:

Organism=Escherichia coli, GI87082361, Length=172, Percent_Identity=26.7441860465116, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007440 [H]

Pfam domain/function: PF04345 Chor_lyase [H]

EC number: =4.1.3.40 [H]

Molecular weight: Translated: 21696; Mature: 21696

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTSLSFPYGESIQWFCAESANKLPKSPLKEWLLATGSLTQKLKTCCTQFEVKVLGEGL
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
HAPLDGEYPQQGSVWIREVLLCLDSIPWVFARTLIPEKLMAERQADFLGLGTRPLGELLF
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SQDHFIPGRIEVASFETCSRLAHLAESLDQSVEHELWGRRRYFHHGEHEMIVSEIFLPAA
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EQAIRKLESEL
HHHHHHHHHCC
>Mature Secondary Structure
MNVTSLSFPYGESIQWFCAESANKLPKSPLKEWLLATGSLTQKLKTCCTQFEVKVLGEGL
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
HAPLDGEYPQQGSVWIREVLLCLDSIPWVFARTLIPEKLMAERQADFLGLGTRPLGELLF
CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SQDHFIPGRIEVASFETCSRLAHLAESLDQSVEHELWGRRRYFHHGEHEMIVSEIFLPAA
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EQAIRKLESEL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA