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The map label for this gene is yoaF [H]

Identifier: 160873259

GI number: 160873259

Start: 155830

End: 156087

Strand: Reverse

Name: yoaF [H]

Synonym: Sbal195_0133

Alternate gene names: 160873259

Gene position: 156087-155830 (Counterclockwise)

Preceding gene: 160873260

Following gene: 160873256

Centisome position: 2.92

GC content: 51.16

Gene sequence:

>258_bases
ATGAAAGTCCTATTACCGCTTGCTGCAACTTTACTGCTGGCAACTGTGGCACTCGTGGGTTGCGGCGAAGCTGAAATACC
TGCTGCGCAAGTTAAGATTGCCAATCCCGCCTCTGAATATTGCATCTCTGTCGGAGGCAGCTTGGCAATAGAGAAAACCG
CCGAAGGTGAGCATGGCATCTGTACCTTGCCAAACGGTGAAGCCATGGAAGAGTGGGCGTTATTCCGCCGTGATCATCAG
GAAAAAAAGCCGCAGTAA

Upstream 100 bases:

>100_bases
ATGCCATCGATAGCGCAGCCGCTTTGTATATGGATATCATCAACTTATTCCTCCGCATTCTGCGGATTCTAGGGCGCAAA
TAAGTGTTCAAGGAGTGTCT

Downstream 100 bases:

>100_bases
CAGTGGTTCTTTTACCTTTAAAAAAACAGGCGCCAATAATGGCGCCTGTTTTTTTATTAAGTAAACTGAAAATCTTAACG
GGCTAAGTGTTCAGCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKVLLPLAATLLLATVALVGCGEAEIPAAQVKIANPASEYCISVGGSLAIEKTAEGEHGICTLPNGEAMEEWALFRRDHQ
EKKPQ

Sequences:

>Translated_85_residues
MKVLLPLAATLLLATVALVGCGEAEIPAAQVKIANPASEYCISVGGSLAIEKTAEGEHGICTLPNGEAMEEWALFRRDHQ
EKKPQ
>Mature_85_residues
MKVLLPLAATLLLATVALVGCGEAEIPAAQVKIANPASEYCISVGGSLAIEKTAEGEHGICTLPNGEAMEEWALFRRDHQ
EKKPQ

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=77, Percent_Identity=42.8571428571429, Blast_Score=65, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 9001; Mature: 9001

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLPLAATLLLATVALVGCGEAEIPAAQVKIANPASEYCISVGGSLAIEKTAEGEHGI
CEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCEEEEECCCCCCCE
CTLPNGEAMEEWALFRRDHQEKKPQ
EECCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVLLPLAATLLLATVALVGCGEAEIPAAQVKIANPASEYCISVGGSLAIEKTAEGEHGI
CEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCEEEEECCCCCCCE
CTLPNGEAMEEWALFRRDHQEKKPQ
EECCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]