The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901399

Identifier: 159901399

GI number: 159901399

Start: 6224261

End: 6225157

Strand: Reverse

Name: 159901399

Synonym: Haur_4888

Alternate gene names: NA

Gene position: 6225157-6224261 (Counterclockwise)

Preceding gene: 159901405

Following gene: 159901398

Centisome position: 98.09

GC content: 50.61

Gene sequence:

>897_bases
ATGTCACCGATTTGGGAACCATTGCTCGCTGGCTTGATCGATTATGCTGGGCTGTTTCCCCCAGCTGCTCTAGCCATGGA
TCAAGCAACCAGCCAATATGCCAACTATCGTGCGAGCAACCAACACGGCTATTTAGCCCGTTTTATTTTGCCCTATAGCC
GCATTGCCGAATGGCAAGCCAGCCTTGGCAAGCAACCAAGCCAACCTTGGATAATTAGCCTCTTAGCCACTGATCCAGCC
CAACTTGCTGAAATTCCCACGCTTAATCAGCGCTATCAGGGTTGGTTTGTAATTGATACGGTTGAAATCAAGGCCGAGAG
TCTCGAACAAATCGCCGCGATTCATGCAGTCATACCTGAACAAGTTACGGTTTTCGTTGAAATTCCCCACGATCATGATC
CAAGCCTTTTAATTGCGGCCTTGCGCAGTACTGGGCTTCGCGCCAAACTTCGCACTGGCGGAATTATTGCCGCAGCCTTT
CCTGAGCCAGAGCAGATTGTGCGCTTTCTGCATGCCTGCATCAGCAATGGGGTCGCCTACAAAGCGACTGCTGGTTTACA
CCACCCCTTGCGTGGCCAATATCGCCTGACCTATGCAACGGATAGTGCTGAGGGCTGGATGTATGGCTACCTCAATCTGA
TTTTAGCCAGCGCCTTGTTGCAAGCAAATGCCGCCCATCAAGAAGTGCTAGCAGCTTTATTGGAGCATGATCCCATTGCA
ATCAAGTTGACTGAGCAAAAAATGCGCTGGCGTAACTGGCAATTTGAACATGATGATGTGCTGGCCGTGCGCCACAGCGG
CTTGATCGCCTTTGGTTCATGTTCATTCGAGGAGCCAATCAACGAATTTGCCAGCTTTATCGAGCAGCCAGCCTTGGCCT
ATGGAGCAACCAATTAA

Upstream 100 bases:

>100_bases
TGGAATTAATCTCAGCTATTTGCCCCAAGTGCTCACTTCACGTACACTTGCAGTATCATCGGCTATCGTATGTCCCACAA
TGACGTGGAGGATTTTGGAT

Downstream 100 bases:

>100_bases
ATGTTAAACGAAACCCATGATCCAGCTTTGCGCAGTTGGGTAGCCAGCGCCAACCTTGCTGGAGCCGATTTTCCGATTCA
AAATTTACCGTTTGGGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSPIWEPLLAGLIDYAGLFPPAALAMDQATSQYANYRASNQHGYLARFILPYSRIAEWQASLGKQPSQPWIISLLATDPA
QLAEIPTLNQRYQGWFVIDTVEIKAESLEQIAAIHAVIPEQVTVFVEIPHDHDPSLLIAALRSTGLRAKLRTGGIIAAAF
PEPEQIVRFLHACISNGVAYKATAGLHHPLRGQYRLTYATDSAEGWMYGYLNLILASALLQANAAHQEVLAALLEHDPIA
IKLTEQKMRWRNWQFEHDDVLAVRHSGLIAFGSCSFEEPINEFASFIEQPALAYGATN

Sequences:

>Translated_298_residues
MSPIWEPLLAGLIDYAGLFPPAALAMDQATSQYANYRASNQHGYLARFILPYSRIAEWQASLGKQPSQPWIISLLATDPA
QLAEIPTLNQRYQGWFVIDTVEIKAESLEQIAAIHAVIPEQVTVFVEIPHDHDPSLLIAALRSTGLRAKLRTGGIIAAAF
PEPEQIVRFLHACISNGVAYKATAGLHHPLRGQYRLTYATDSAEGWMYGYLNLILASALLQANAAHQEVLAALLEHDPIA
IKLTEQKMRWRNWQFEHDDVLAVRHSGLIAFGSCSFEEPINEFASFIEQPALAYGATN
>Mature_297_residues
SPIWEPLLAGLIDYAGLFPPAALAMDQATSQYANYRASNQHGYLARFILPYSRIAEWQASLGKQPSQPWIISLLATDPAQ
LAEIPTLNQRYQGWFVIDTVEIKAESLEQIAAIHAVIPEQVTVFVEIPHDHDPSLLIAALRSTGLRAKLRTGGIIAAAFP
EPEQIVRFLHACISNGVAYKATAGLHHPLRGQYRLTYATDSAEGWMYGYLNLILASALLQANAAHQEVLAALLEHDPIAI
KLTEQKMRWRNWQFEHDDVLAVRHSGLIAFGSCSFEEPINEFASFIEQPALAYGATN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33011; Mature: 32880

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIWEPLLAGLIDYAGLFPPAALAMDQATSQYANYRASNQHGYLARFILPYSRIAEWQA
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
SLGKQPSQPWIISLLATDPAQLAEIPTLNQRYQGWFVIDTVEIKAESLEQIAAIHAVIPE
HHCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCC
QVTVFVEIPHDHDPSLLIAALRSTGLRAKLRTGGIIAAAFPEPEQIVRFLHACISNGVAY
EEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCEE
KATAGLHHPLRGQYRLTYATDSAEGWMYGYLNLILASALLQANAAHQEVLAALLEHDPIA
EEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEE
IKLTEQKMRWRNWQFEHDDVLAVRHSGLIAFGSCSFEEPINEFASFIEQPALAYGATN
EEEEHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure 
SPIWEPLLAGLIDYAGLFPPAALAMDQATSQYANYRASNQHGYLARFILPYSRIAEWQA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
SLGKQPSQPWIISLLATDPAQLAEIPTLNQRYQGWFVIDTVEIKAESLEQIAAIHAVIPE
HHCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCC
QVTVFVEIPHDHDPSLLIAALRSTGLRAKLRTGGIIAAAFPEPEQIVRFLHACISNGVAY
EEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCEE
KATAGLHHPLRGQYRLTYATDSAEGWMYGYLNLILASALLQANAAHQEVLAALLEHDPIA
EEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEE
IKLTEQKMRWRNWQFEHDDVLAVRHSGLIAFGSCSFEEPINEFASFIEQPALAYGATN
EEEEHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA