Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901382

Identifier: 159901382

GI number: 159901382

Start: 6204881

End: 6206362

Strand: Direct

Name: 159901382

Synonym: Haur_4871

Alternate gene names: NA

Gene position: 6204881-6206362 (Clockwise)

Preceding gene: 159901380

Following gene: 159901383

Centisome position: 97.77

GC content: 48.99

Gene sequence:

>1482_bases
ATGACCCGCCAACAACAGCTTGCGCTGTATCTTTTGCCAGTGGCTTTTGGGCTGGCCCTGATTGCCGATTTACTAGGCTT
GTTTCACCAATTATGGGGCATTAATTTTGTACTTTGGACGTTGCTCTCAAGCGGCGCAATCGTTGGCTTGGCGTTTAAGC
AAGCCCAAGCCTTGCCCAAAGAAACCTGGCTCTGGCTCGTAGTTGCCAATATCGCAAGCTTGGGCTTTGTGCTGCGCGAT
AATGGCGCGATCTTGTTTTGGCTGGGCTTGTGTTGGGTCTTGGCTTGGATGCTCATTTTCAGCCAACCTTACCGCGCTCA
TTGGCAATTGGCCTCAATTCGCGGCTGGATTGTATCGGGCGTGGTGGCTGGATTTGGGGCTGCGTTCGGTAGCTTTGCCG
CATCGATTCATCTGCCACTGCGGGTTGGTAATTTCACTAGCGCCAAATTACGGCCAATTTTGATTGGGCTAGGTTTAGCC
TTGCCATTATTGTGTGTGTTTGGCGGCTTGTTTGCCTCAGCCGATGCAGTATTTGAAAATATTTTCGCCGATTTGTTTAA
CTGGAATTTGGATTGGCTGTTTGAGCATGCATTTGTGGTGTTGTTTAGCACTTGGGCGATTTTGGGTTGTGGCTGGATTT
TATTTGCTGCACCAAAACCAGATATTGCGTTGAGCCAACGTCCAAGCTTATTCAACATTGGCAAGATCGAAGTTGGCATC
ATTTTGGGCTTGCTGAATGCGCTTTTTGGTTTGTTTGTATTGATTCAAATTCGCTATTTATTTGGTGGCGAACAGCAAAT
TGCCGAAGGTATTAGCTATGCCGATTATGCCCGCCGTGGCTTTTTCGAGTTGGTAACCGTGGCCTTATTGGTCTTGCCAA
CGTTGCTAGTTGGTAGCTGGCTGAGTGAACAACGAACTGAAGCCCAACCCTTGTTTCGGATTTTGGCCTTGGTATTATTG
GTACAAGTTGGGGTGGTGTTGGCTTCGGCTGTTTCGCGTATGCTGCTCTACATCGATGCTTATGGTTTGACTGAATCGCG
GATTCAAGCAACAGCCTTGATGATTTGGATTGTGCTGGTGGCCTTGTGGTTTGTGGCAACCGTGCTGCGCCAACGGGGTC
AATATTTTGCCAATGGAGCCTTGGTTGCGGCCATGTTGGTGCTGATTGGCTTGGTTTTGTTGAATCCTAGCAATTTGATT
GTGCGCTACAACGCCAGCCATCGCGGCGTGGCCAGCTTTGATGGCTACTACATTGGCAGTTTGGCCGATGATGCTGATGC
CGTGCCAGCGATTATCGAGGTGCTGCCGAGCTTGCCTGCGGAACAAAATTGCCAAATTGCTACGCTCTTATTAGATAATT
GGCAAGAAAATAACGACGATTGGCGCAGTGCCAACCTTAGTCGCAGCAATGCTCGTCAGGCTGTGCTGCAAAACGAACGA
ATGCTGACCGACATGAGTTGTCCAATTGATCGCTCAATGTGA

Upstream 100 bases:

>100_bases
CATTTACGCTGCACTTGAGTGCGCCGAATCTGGCACTTGGGTGCTAGCGCTGGCATCTACAATCCAAGCACCGAGGATAG
CTTGATTGCGAGGAAATTGT

Downstream 100 bases:

>100_bases
TCTTGGTTGCTGGTGGTAAGTGGTACAATTGACCTTCGCTACCGCCCAAGCGTGGAGCACCAATCAGATCAATCTGGCAA
TTGTTGCCAGCAGCACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPKETWLWLVVANIASLGFVLRD
NGAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSGVVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLA
LPLLCVFGGLFASADAVFENIFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGI
ILGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSWLSEQRTEAQPLFRILALVLL
VQVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLVALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLI
VRYNASHRGVASFDGYYIGSLADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNER
MLTDMSCPIDRSM

Sequences:

>Translated_493_residues
MTRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPKETWLWLVVANIASLGFVLRD
NGAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSGVVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLA
LPLLCVFGGLFASADAVFENIFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGI
ILGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSWLSEQRTEAQPLFRILALVLL
VQVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLVALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLI
VRYNASHRGVASFDGYYIGSLADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNER
MLTDMSCPIDRSM
>Mature_492_residues
TRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPKETWLWLVVANIASLGFVLRDN
GAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSGVVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLAL
PLLCVFGGLFASADAVFENIFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGII
LGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSWLSEQRTEAQPLFRILALVLLV
QVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLVALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLIV
RYNASHRGVASFDGYYIGSLADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNERM
LTDMSCPIDRSM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54315; Mature: 54183

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCH
ETWLWLVVANIASLGFVLRDNGAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSG
HHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLALPLLCVFGGLFASADAVFEN
HHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCEECCHHHHHH
ILGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSW
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEQRTEAQPLFRILALVLLVQVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLIVRYNASHRGVASFDGYYIGS
HHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECC
LADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNER
CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCHHHCCCCHHHHHHHHHHCCH
MLTDMSCPIDRSM
HHHCCCCCCCCCC
>Mature Secondary Structure 
TRQQQLALYLLPVAFGLALIADLLGLFHQLWGINFVLWTLLSSGAIVGLAFKQAQALPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCH
ETWLWLVVANIASLGFVLRDNGAILFWLGLCWVLAWMLIFSQPYRAHWQLASIRGWIVSG
HHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VVAGFGAAFGSFAASIHLPLRVGNFTSAKLRPILIGLGLALPLLCVFGGLFASADAVFEN
HHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFADLFNWNLDWLFEHAFVVLFSTWAILGCGWILFAAPKPDIALSQRPSLFNIGKIEVGI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCCCEECCHHHHHH
ILGLLNALFGLFVLIQIRYLFGGEQQIAEGISYADYARRGFFELVTVALLVLPTLLVGSW
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEQRTEAQPLFRILALVLLVQVGVVLASAVSRMLLYIDAYGLTESRIQATALMIWIVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ALWFVATVLRQRGQYFANGALVAAMLVLIGLVLLNPSNLIVRYNASHRGVASFDGYYIGS
HHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECC
LADDADAVPAIIEVLPSLPAEQNCQIATLLLDNWQENNDDWRSANLSRSNARQAVLQNER
CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCHHHCCCCHHHHHHHHHHCCH
MLTDMSCPIDRSM
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA