| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is mtnA [H]
Identifier: 159901380
GI number: 159901380
Start: 6203158
End: 6204237
Strand: Direct
Name: mtnA [H]
Synonym: Haur_4869
Alternate gene names: 159901380
Gene position: 6203158-6204237 (Clockwise)
Preceding gene: 159901376
Following gene: 159901382
Centisome position: 97.74
GC content: 52.31
Gene sequence:
>1080_bases ATGACTGGACGTTTACCTTTGCTGACCCGCCGTGGCGATACTTTGCGCTACGACCGCGAAAAAGGCATTGTTGCTATATT AAATCGCCGTTTGTATCCGGCCCAAACTGTGTGGGTCGATTGTACTGATCTCGAAGTCGTGGCTCAAGCCATCGAGACGA TGGTAATTCAGGGTGGCCCGCCCTTGGCCTATGCTGCTGGCTATGGGTTGGCCTTAGCCCTCGATCAAGCTACCGACTAT TCGTTGGCCCAACAGCAAGTGGTTTTAGCCCTGGCCTTGGAGCGCTTGCGCCGCACTCGCCCAACCGCCGACGATTTGCA CACAATTTTGGCCGAGGCCGAACGCTTAGCCTTGCAGGCGCTTGAGCAAAATCAAGCTCCCAATGATGTGGTTTATGGCT ATGTTGCGGGCGAAATTCAGCGTGGCGACCGTTCAGCCGAACGTTGTGGCGTGCGAGCAGCCGAGTTGTTGACTGATGGC GATACGGTTTTGACGGTTTGCTATCCTGGCGCGGCCTTTAATTGGATGCTCTATACGGCGGTGGTTAAACAAGGCAAACA AGTGGCAGTTATGCCCACTGAAACCCGACCCTATGGACAAGGCATTCGGCTAACCGCCTCGCAAGCCTTGGAAATTGGCT CACAGGTGACGGTGATTAATGATAATATGTCGGGCTTTTGTTTTAGCCGCGATATGATCACGGTTTATATAACGGCGGCT GATCGTATTGCCCTCGATGGCTCAATTGCCAATAAAGTTGGCACCTATACCAATGCCGTGTTAGCAAAACGCCATGGTGT GCCGTTTTATGTGCTTGGCTACGATGGCCCTGATCTCAACACCGCAACTGGTGCTGAGATTCCGATTGAAGAACGCAATG GTGATGAAGTGCTGATGATGAATGGTCAGCGTATTGCTCCAGAAGGCGTGCGCGGCTATTATCCAGCCTTTGATGTAACC CCGCCAGAGCTGATCAGTAGCATCGTGACTGATCGCGGAATTTATCGACCAGCTATGATTCAGCGCTATTTGGACGATAG CAGCGACGCACCGCTTGAGGTTATTCCGTTGTTGGGTTAA
Upstream 100 bases:
>100_bases GCCTTAGTTTGCTGCTTTACGCGCTATCCTACCACGCTCAAGCCAGTTGCGGCGCAATCTCTGCTACAATTTTAGCATCA TAACATAGATGAGGTTGCTG
Downstream 100 bases:
>100_bases ATTTCAAGCCCAGTGCCAAGGGTTGAGCTTAGCACTGGGTTTTTTCGTTAATTAAGCGCAATGCGAAAATGATAGGCGCT GATCGTTAAGCCTTCGCGAA
Product: eIF-2B alpha/beta/delta-like protein
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTGRLPLLTRRGDTLRYDREKGIVAILNRRLYPAQTVWVDCTDLEVVAQAIETMVIQGGPPLAYAAGYGLALALDQATDY SLAQQQVVLALALERLRRTRPTADDLHTILAEAERLALQALEQNQAPNDVVYGYVAGEIQRGDRSAERCGVRAAELLTDG DTVLTVCYPGAAFNWMLYTAVVKQGKQVAVMPTETRPYGQGIRLTASQALEIGSQVTVINDNMSGFCFSRDMITVYITAA DRIALDGSIANKVGTYTNAVLAKRHGVPFYVLGYDGPDLNTATGAEIPIEERNGDEVLMMNGQRIAPEGVRGYYPAFDVT PPELISSIVTDRGIYRPAMIQRYLDDSSDAPLEVIPLLG
Sequences:
>Translated_359_residues MTGRLPLLTRRGDTLRYDREKGIVAILNRRLYPAQTVWVDCTDLEVVAQAIETMVIQGGPPLAYAAGYGLALALDQATDY SLAQQQVVLALALERLRRTRPTADDLHTILAEAERLALQALEQNQAPNDVVYGYVAGEIQRGDRSAERCGVRAAELLTDG DTVLTVCYPGAAFNWMLYTAVVKQGKQVAVMPTETRPYGQGIRLTASQALEIGSQVTVINDNMSGFCFSRDMITVYITAA DRIALDGSIANKVGTYTNAVLAKRHGVPFYVLGYDGPDLNTATGAEIPIEERNGDEVLMMNGQRIAPEGVRGYYPAFDVT PPELISSIVTDRGIYRPAMIQRYLDDSSDAPLEVIPLLG >Mature_358_residues TGRLPLLTRRGDTLRYDREKGIVAILNRRLYPAQTVWVDCTDLEVVAQAIETMVIQGGPPLAYAAGYGLALALDQATDYS LAQQQVVLALALERLRRTRPTADDLHTILAEAERLALQALEQNQAPNDVVYGYVAGEIQRGDRSAERCGVRAAELLTDGD TVLTVCYPGAAFNWMLYTAVVKQGKQVAVMPTETRPYGQGIRLTASQALEIGSQVTVINDNMSGFCFSRDMITVYITAAD RIALDGSIANKVGTYTNAVLAKRHGVPFYVLGYDGPDLNTATGAEIPIEERNGDEVLMMNGQRIAPEGVRGYYPAFDVTP PELISSIVTDRGIYRPAMIQRYLDDSSDAPLEVIPLLG
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=354, Percent_Identity=33.0508474576271, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI23943880, Length=340, Percent_Identity=31.1764705882353, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17557462, Length=353, Percent_Identity=31.1614730878187, Blast_Score=148, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6325375, Length=389, Percent_Identity=27.5064267352185, Blast_Score=111, Evalue=1e-25, Organism=Drosophila melanogaster, GI21357667, Length=363, Percent_Identity=32.7823691460055, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI24651647, Length=363, Percent_Identity=32.7823691460055, Blast_Score=135, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 39161; Mature: 39030
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRLPLLTRRGDTLRYDREKGIVAILNRRLYPAQTVWVDCTDLEVVAQAIETMVIQGGP CCCCCCEEECCCCCEEECCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHEEECCCC PLAYAAGYGLALALDQATDYSLAQQQVVLALALERLRRTRPTADDLHTILAEAERLALQA CEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LEQNQAPNDVVYGYVAGEIQRGDRSAERCGVRAAELLTDGDTVLTVCYPGAAFNWMLYTA HHHCCCCCCEEEEEEEEEEECCCCCHHHHCCHHHHHCCCCCEEEEEEECCCHHHHHHHHH VVKQGKQVAVMPTETRPYGQGIRLTASQALEIGSQVTVINDNMSGFCFSRDMITVYITAA HHHCCCEEEEEECCCCCCCCCEEEEHHHHHHCCCEEEEEECCCCCEEEECCEEEEEEEEC DRIALDGSIANKVGTYTNAVLAKRHGVPFYVLGYDGPDLNTATGAEIPIEERNGDEVLMM CEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCEEEEE NGQRIAPEGVRGYYPAFDVTPPELISSIVTDRGIYRPAMIQRYLDDSSDAPLEVIPLLG CCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCC >Mature Secondary Structure TGRLPLLTRRGDTLRYDREKGIVAILNRRLYPAQTVWVDCTDLEVVAQAIETMVIQGGP CCCCCEEECCCCCEEECCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHEEECCCC PLAYAAGYGLALALDQATDYSLAQQQVVLALALERLRRTRPTADDLHTILAEAERLALQA CEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LEQNQAPNDVVYGYVAGEIQRGDRSAERCGVRAAELLTDGDTVLTVCYPGAAFNWMLYTA HHHCCCCCCEEEEEEEEEEECCCCCHHHHCCHHHHHCCCCCEEEEEEECCCHHHHHHHHH VVKQGKQVAVMPTETRPYGQGIRLTASQALEIGSQVTVINDNMSGFCFSRDMITVYITAA HHHCCCEEEEEECCCCCCCCCEEEEHHHHHHCCCEEEEEECCCCCEEEECCEEEEEEEEC DRIALDGSIANKVGTYTNAVLAKRHGVPFYVLGYDGPDLNTATGAEIPIEERNGDEVLMM CEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCEEEEE NGQRIAPEGVRGYYPAFDVTPPELISSIVTDRGIYRPAMIQRYLDDSSDAPLEVIPLLG CCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA