| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901370
Identifier: 159901370
GI number: 159901370
Start: 6194039
End: 6194536
Strand: Direct
Name: 159901370
Synonym: Haur_4859
Alternate gene names: NA
Gene position: 6194039-6194536 (Clockwise)
Preceding gene: 159901369
Following gene: 159901371
Centisome position: 97.6
GC content: 50.4
Gene sequence:
>498_bases GTGGCTAAACTCAATTGGCACGATCAACGTCCGTTAATTTTGCTCGATATTGATGGTGTCATCAATATGTTTGGCCGTTT GGGGCGCGAACAACAGCAAATCCCGCCGGGGATTCCAGTGCAATACCCGCCCCAAATTCATGCTTCGATCGCCCGGCTGG CCAAAATCGGCCAATTAATCTGGTGTTCGACCTGGCTGCAACTAGCCAATACTGGCTTACATAGCGATCTTGGCTTACCA GAATTACCATTAATCGAACCATTGCCCGAAAATCCGACGGCGATTTTGTGGAAGCTCAACAGCGTTGCCAAGCACCTTGC CGATTGGCAAACCCCGATCTTTTGGATCGAAGATGGTTTTCGGCCTCAAGTGCATACCTGGGCGCAACAACGCAGCAAGC AAGGCCGTTTTACTCAATTAATCGATGTGCGCGAAACTGGCTTAGTGCCCCAAGTTGTTGATCAACTCGAACGGACGCTG GCTCATTTCGCGGTTTGA
Upstream 100 bases:
>100_bases GATTTGCGCCAATTGTCGGTTCGTGCCAACTTACAAGATGGCATCGAATATGCGCTCGAACAAGTTGGACTTGGCATTCG CCCATTACAAGAGCAACGGC
Downstream 100 bases:
>100_bases GGAAACCAAACGATTCATGTTGACCCATCTTGATGATCAAGGGCGAGCGCATATGGTTGATGTTGGTGACAAGGCAGTTA CCCAACGCCAAGCCCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAKLNWHDQRPLILLDIDGVINMFGRLGREQQQIPPGIPVQYPPQIHASIARLAKIGQLIWCSTWLQLANTGLHSDLGLP ELPLIEPLPENPTAILWKLNSVAKHLADWQTPIFWIEDGFRPQVHTWAQQRSKQGRFTQLIDVRETGLVPQVVDQLERTL AHFAV
Sequences:
>Translated_165_residues MAKLNWHDQRPLILLDIDGVINMFGRLGREQQQIPPGIPVQYPPQIHASIARLAKIGQLIWCSTWLQLANTGLHSDLGLP ELPLIEPLPENPTAILWKLNSVAKHLADWQTPIFWIEDGFRPQVHTWAQQRSKQGRFTQLIDVRETGLVPQVVDQLERTL AHFAV >Mature_164_residues AKLNWHDQRPLILLDIDGVINMFGRLGREQQQIPPGIPVQYPPQIHASIARLAKIGQLIWCSTWLQLANTGLHSDLGLPE LPLIEPLPENPTAILWKLNSVAKHLADWQTPIFWIEDGFRPQVHTWAQQRSKQGRFTQLIDVRETGLVPQVVDQLERTLA HFAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18823; Mature: 18692
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLNWHDQRPLILLDIDGVINMFGRLGREQQQIPPGIPVQYPPQIHASIARLAKIGQLI CCCCCCCCCCCEEEEECHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH WCSTWLQLANTGLHSDLGLPELPLIEPLPENPTAILWKLNSVAKHLADWQTPIFWIEDGF HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEECCCC RPQVHTWAQQRSKQGRFTQLIDVRETGLVPQVVDQLERTLAHFAV CCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKLNWHDQRPLILLDIDGVINMFGRLGREQQQIPPGIPVQYPPQIHASIARLAKIGQLI CCCCCCCCCCEEEEECHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH WCSTWLQLANTGLHSDLGLPELPLIEPLPENPTAILWKLNSVAKHLADWQTPIFWIEDGF HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEECCCC RPQVHTWAQQRSKQGRFTQLIDVRETGLVPQVVDQLERTLAHFAV CCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA