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The map label for this gene is fas5 [H]

Identifier: 159901284

GI number: 159901284

Start: 6087278

End: 6088729

Strand: Direct

Name: fas5 [H]

Synonym: Haur_4772

Alternate gene names: 159901284

Gene position: 6087278-6088729 (Clockwise)

Preceding gene: 159901283

Following gene: 159901290

Centisome position: 95.91

GC content: 49.45

Gene sequence:

>1452_bases
ATGACGCAACTTAGCCGCCGTACATTCTTGAAAAGTCTCGTTGCAGGTGCTGTGGTAGTTGGTTTTGACCGTGCTACTAG
TTCGTGGGTCACTTCAGCCCACGCCGCCGAGCAACTCGCGCCAAATTTCCCAACGTTCGATGGTGTGTTGTACACCGATG
CCGCCACCCGCGCCGAAGCAGCCGATGATTACGGTCATATTATTCACCGTACTCCCAATGCTGTGCTCAAACCTGGCTCA
GTCAATGATATTGTGCGCCTCGTTCGCTTTGCCAAAAATAACAATATTAAAATCTCAGGTCGTGGTCAAGGTCACTCCAC
CTATGGTCAGCCCCAAATTCAAGGCGGGGTGGTGATCGATATGAGTACCATGAACGCGATTCATGAAATTGGCCGCGATT
ATGTCATTGCTGATGCTGGATTGAAATGGCATCAACTGCTTGATAGCACCTTGGCCGAAGGCCTAACCCCACCTGTGATG
ACCGATTATATTGAGCTATCAATCGGTGGCACATTGAGCGTCGGCGGGATTGGCGGGGCCAGCCATCAACATGGTGTGCA
AATCGACAACGTAATTGAATTGACGGTTGTTACCGGCGAAGGTAACTTAGAAACCTGTTCAAAAAACCGCAACAAAGATT
TATTTGAATCGGTGCTTGGTGGCTTGGGTCAATTTGCCATTATTGTGCGGGCTAAGCTCAAATTGATTCGCGCCGAAACC
CATGCTCGTGTCTTCAACCTGTTCTATGACGATATCGAAACTTTTACTGGCGATCAAACCCGCTTGATTCGCGATGGTCG
CTTCGATTATGTTGAAGGCCAAGTCGTACCCAAGGCTGGTGGTGGCTGGAACTTCATGCTCGAAGCAGTCAAATATTTCT
CAGCCAACAACACGCCTAACAACACCCGCTTGTTGCGTAATTTGAGCTACAACCAAGGTACAGAAGTTATTTCGGATACG
ACCTATTTCGCGTTCTTGAATCGCTTGGAAGCAACCGAAGCCTTCTTACGCTCAATCGGTGTTTGGTTCTTGCCACACCC
ATGGTTCGATGTATTCGTCAAGAGCCGCCACGTCAATCAATATGTTGGCAATATCTTGGAAACCTTGACCCTCGACGATA
CTGGCCAAGGCCCAATCTTGCTCTATCCAGTCAAGACCAACAAATTTACCAAGCCATTCTTCCGCGTACCCGATGGCGAA
ATCGTCTTCTTGTTTGATATTTTGCGCACCGCGCCAAATATTCCTGAGGTGATCAACGCCATGATGGCTAGCAATCGCGA
GTTGTTTGAAACCAACCGCGACCTTGGTGGCAACCGCTACGCAATTGGGGCAATCGAGTTCGACCAAAACGACTGGCGGC
AACACTTTGGCAATGTCTGGAACGACTTCCGCCGCGCCAAGAACCGCTACGATCCTTGCAATATCCTTGGTGGGGGCCAA
GGCATATTCTAA

Upstream 100 bases:

>100_bases
ACTCGCAGATTCACACTTGACACCTCATTCCAGCCCTACGTCATAGCTAATAGGTGGTGAATTTGCGGTCAGTCTTTTTT
AACCGAAAACGAGGGACGTT

Downstream 100 bases:

>100_bases
GCCGAAGATCGTGGTTTCCAACGCCTATCGAATTACTCGATAGGCGTTTTTGTTTGGTGATTGATCCACGAAGGATATAG
CCGATTGGCTGGAGGCACTT

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MTQLSRRTFLKSLVAGAVVVGFDRATSSWVTSAHAAEQLAPNFPTFDGVLYTDAATRAEAADDYGHIIHRTPNAVLKPGS
VNDIVRLVRFAKNNNIKISGRGQGHSTYGQPQIQGGVVIDMSTMNAIHEIGRDYVIADAGLKWHQLLDSTLAEGLTPPVM
TDYIELSIGGTLSVGGIGGASHQHGVQIDNVIELTVVTGEGNLETCSKNRNKDLFESVLGGLGQFAIIVRAKLKLIRAET
HARVFNLFYDDIETFTGDQTRLIRDGRFDYVEGQVVPKAGGGWNFMLEAVKYFSANNTPNNTRLLRNLSYNQGTEVISDT
TYFAFLNRLEATEAFLRSIGVWFLPHPWFDVFVKSRHVNQYVGNILETLTLDDTGQGPILLYPVKTNKFTKPFFRVPDGE
IVFLFDILRTAPNIPEVINAMMASNRELFETNRDLGGNRYAIGAIEFDQNDWRQHFGNVWNDFRRAKNRYDPCNILGGGQ
GIF

Sequences:

>Translated_483_residues
MTQLSRRTFLKSLVAGAVVVGFDRATSSWVTSAHAAEQLAPNFPTFDGVLYTDAATRAEAADDYGHIIHRTPNAVLKPGS
VNDIVRLVRFAKNNNIKISGRGQGHSTYGQPQIQGGVVIDMSTMNAIHEIGRDYVIADAGLKWHQLLDSTLAEGLTPPVM
TDYIELSIGGTLSVGGIGGASHQHGVQIDNVIELTVVTGEGNLETCSKNRNKDLFESVLGGLGQFAIIVRAKLKLIRAET
HARVFNLFYDDIETFTGDQTRLIRDGRFDYVEGQVVPKAGGGWNFMLEAVKYFSANNTPNNTRLLRNLSYNQGTEVISDT
TYFAFLNRLEATEAFLRSIGVWFLPHPWFDVFVKSRHVNQYVGNILETLTLDDTGQGPILLYPVKTNKFTKPFFRVPDGE
IVFLFDILRTAPNIPEVINAMMASNRELFETNRDLGGNRYAIGAIEFDQNDWRQHFGNVWNDFRRAKNRYDPCNILGGGQ
GIF
>Mature_482_residues
TQLSRRTFLKSLVAGAVVVGFDRATSSWVTSAHAAEQLAPNFPTFDGVLYTDAATRAEAADDYGHIIHRTPNAVLKPGSV
NDIVRLVRFAKNNNIKISGRGQGHSTYGQPQIQGGVVIDMSTMNAIHEIGRDYVIADAGLKWHQLLDSTLAEGLTPPVMT
DYIELSIGGTLSVGGIGGASHQHGVQIDNVIELTVVTGEGNLETCSKNRNKDLFESVLGGLGQFAIIVRAKLKLIRAETH
ARVFNLFYDDIETFTGDQTRLIRDGRFDYVEGQVVPKAGGGWNFMLEAVKYFSANNTPNNTRLLRNLSYNQGTEVISDTT
YFAFLNRLEATEAFLRSIGVWFLPHPWFDVFVKSRHVNQYVGNILETLTLDDTGQGPILLYPVKTNKFTKPFFRVPDGEI
VFLFDILRTAPNIPEVINAMMASNRELFETNRDLGGNRYAIGAIEFDQNDWRQHFGNVWNDFRRAKNRYDPCNILGGGQG
IF

Specific function: The FAS-operon encodes genes involved in cytokinin production and in host plant fasciation (leafy gall) [H]

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323553, Length=180, Percent_Identity=23.8888888888889, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015345
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF09265 Cytokin-bind; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 53686; Mature: 53555

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00862 OX2_COVAL_FAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLSRRTFLKSLVAGAVVVGFDRATSSWVTSAHAAEQLAPNFPTFDGVLYTDAATRAEA
CCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHH
ADDYGHIIHRTPNAVLKPGSVNDIVRLVRFAKNNNIKISGRGQGHSTYGQPQIQGGVVID
CHHHCHHEECCCCCEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEE
MSTMNAIHEIGRDYVIADAGLKWHQLLDSTLAEGLTPPVMTDYIELSIGGTLSVGGIGGA
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHCEEEEEECCEEEECCCCCC
SHQHGVQIDNVIELTVVTGEGNLETCSKNRNKDLFESVLGGLGQFAIIVRAKLKLIRAET
CCCCCCEECCEEEEEEEECCCCHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
HARVFNLFYDDIETFTGDQTRLIRDGRFDYVEGQVVPKAGGGWNFMLEAVKYFSANNTPN
HHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCC
NTRLLRNLSYNQGTEVISDTTYFAFLNRLEATEAFLRSIGVWFLPHPWFDVFVKSRHVNQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHH
YVGNILETLTLDDTGQGPILLYPVKTNKFTKPFFRVPDGEIVFLFDILRTAPNIPEVINA
HHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEHHHHHHHCCCCHHHHHH
MMASNRELFETNRDLGGNRYAIGAIEFDQNDWRQHFGNVWNDFRRAKNRYDPCNILGGGQ
HHHCCHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
GIF
CCC
>Mature Secondary Structure 
TQLSRRTFLKSLVAGAVVVGFDRATSSWVTSAHAAEQLAPNFPTFDGVLYTDAATRAEA
CCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHH
ADDYGHIIHRTPNAVLKPGSVNDIVRLVRFAKNNNIKISGRGQGHSTYGQPQIQGGVVID
CHHHCHHEECCCCCEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEE
MSTMNAIHEIGRDYVIADAGLKWHQLLDSTLAEGLTPPVMTDYIELSIGGTLSVGGIGGA
HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHCEEEEEECCEEEECCCCCC
SHQHGVQIDNVIELTVVTGEGNLETCSKNRNKDLFESVLGGLGQFAIIVRAKLKLIRAET
CCCCCCEECCEEEEEEEECCCCHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
HARVFNLFYDDIETFTGDQTRLIRDGRFDYVEGQVVPKAGGGWNFMLEAVKYFSANNTPN
HHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCC
NTRLLRNLSYNQGTEVISDTTYFAFLNRLEATEAFLRSIGVWFLPHPWFDVFVKSRHVNQ
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHH
YVGNILETLTLDDTGQGPILLYPVKTNKFTKPFFRVPDGEIVFLFDILRTAPNIPEVINA
HHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEHHHHHHHCCCCHHHHHH
MMASNRELFETNRDLGGNRYAIGAIEFDQNDWRQHFGNVWNDFRRAKNRYDPCNILGGGQ
HHHCCHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
GIF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8169198 [H]