Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901269

Identifier: 159901269

GI number: 159901269

Start: 6063822

End: 6064337

Strand: Reverse

Name: 159901269

Synonym: Haur_4757

Alternate gene names: NA

Gene position: 6064337-6063822 (Counterclockwise)

Preceding gene: 159901270

Following gene: 159901268

Centisome position: 95.55

GC content: 36.05

Gene sequence:

>516_bases
TTGTTTATGTCATTTATGTCGCTCTATTGGATATATCAAGGCCTGTCTGATAATTGGATTTCGGTAATGCTTAACTCAGT
GGTTGCTTTATATTGTGTTTTTGAGGCAAATACGTATTTGATTGTTGATTCAGAAGGATTATCTATTCATCGAATATTTA
GAGATCGGATACATCTAGCCTGGAGCGATATAGCTGAAAAACAACATTTGAATATAGGCAAATATACCCTAGATTATCTT
TTATTGAACGTACCAAATCCGTCAATCAAAAGTCTCAATTCGAATCAAATCCCGAAGGAGCTACGATCAAGCATTTTTAG
GCTCGATCTATGGGAGCGATCGAGCGAATTGATCGAACTAGTTGAGCCATATCTCTCAACAGAACATCCATCAAACCAAT
TTTTTGTGCCGTTCAATCATATAGATCAAACAAGAATAACCAGAATTTCAATCTTAGTTATCATTGTCGCATTTGCTGTA
GCAGCTTTTACAATCTGGAGACTTTTTGCTGGATAG

Upstream 100 bases:

>100_bases
GTTATATTAATTTTTGTTTATTTATTTTTTTTATAGAAAGTAAATTATGAGTTCTGGAAAATTTAGACCTAAGAATTTTA
GATCTTATGTATCAGTTTCT

Downstream 100 bases:

>100_bases
ATTGTTAGCGGTAGTAATTGTAACTTTTAAAGAACTTCCTGTGTAGTATCTAAGTATACAGTTGCTAAGTATAATATTCC
ATAGCAACGGCTAAGCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLAWSDIAEKQHLNIGKYTLDYL
LLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIELVEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAV
AAFTIWRLFAG

Sequences:

>Translated_171_residues
MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLAWSDIAEKQHLNIGKYTLDYL
LLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIELVEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAV
AAFTIWRLFAG
>Mature_171_residues
MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLAWSDIAEKQHLNIGKYTLDYL
LLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIELVEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAV
AAFTIWRLFAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19933; Mature: 19933

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHH
WSDIAEKQHLNIGKYTLDYLLLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIEL
HHHHHHHHCCCCCCEEEEEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAVAAFTIWRLFAG
HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFMSFMSLYWIYQGLSDNWISVMLNSVVALYCVFEANTYLIVDSEGLSIHRIFRDRIHLA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCEEEEEECCCCCHHHHHHHHHHHH
WSDIAEKQHLNIGKYTLDYLLLNVPNPSIKSLNSNQIPKELRSSIFRLDLWERSSELIEL
HHHHHHHHCCCCCCEEEEEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VEPYLSTEHPSNQFFVPFNHIDQTRITRISILVIIVAFAVAAFTIWRLFAG
HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA